RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SDHCQ99643 169 aaPredicted RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■□□ 18.5
C9orf3-203ENST00000375315 COQ3Q9NZJ6 369 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GIMAP2Q9UG22 337 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF638Q14966 1978 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 SLC38A8A6NNN8 435 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 E5RI56 91 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 H7C4K7 107 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 UBFD1O14562 309 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 TSPAN8P19075 237 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 MSH3P20585 1137 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 GNPDA1P46926 289 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 TWF1Q12792 350 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
C9orf3-203ENST00000375315 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PAGE3Q5JUK9 113 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ANKRD34AQ69YU3 496 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 LETMD1Q6P1Q0 360 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 PLEKHM3Q6ZWE6 761 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 HDDC2Q7Z4H3 204 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 MON1AQ86VX9 555 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
C9orf3-203ENST00000375315 VWA8A3KMH1 1905 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 LOC100506127A0A0U1RQW1 187 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TMEM189-UBE2V1I3L0A0 370 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 SERPINF2P08697 491 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 ITGB6P18564 788 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 LIPAP38571 399 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 RFX2P48378 723 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 RCAN2Q14206 197 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TIGD3Q6B0B8 471 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 UBASH3BQ8TF42 649 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 NT5C3BQ969T7 300 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 RPRD1AQ96P16 312 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-203ENST00000375315 SLC52A3Q9NQ40 469 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 CHD9Q3L8U1 2897 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 ABHD14A-ACY1A0A1B0GW23 586 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 C2orf78A6NCI8 922 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 I3L521 148 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TSPAN4O14817 238 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 PIP5K1BO14986 540 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 PER2O15055 1255 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TLL1O43897 1013 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 FGF18O76093 207 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 F9P00740 461 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 NPPAP01160 153 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 ICAM2P13598 275 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TPH1P17752 444 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 PRKACGP22612 351 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 CXCR3P49682 368 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 ETV1P50549 477 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 PLA2G4EQ3MJ16 856 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 FAM109BQ6ICB4 259 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-203ENST00000375315 HIPK1Q86Z02 1210 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 OR4M1Q8NGD0 313 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 FBXO30Q8TB52 745 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TWIST2Q8WVJ9 160 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
C9orf3-203ENST00000375315 TOE1Q96GM8 510 aaKnown RBP11.83□□□□□ -0.52
C9orf3-203ENST00000375315 KLHL5Q96PQ7 755 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 SMG9Q9H0W8 520 aaKnown RBP11.83□□□□□ -0.52
C9orf3-203ENST00000375315 FBXO44Q9H4M3 255 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 IGSF5Q9NSI5 407 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 KLHL21Q9UJP4 597 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 SNX7Q9UNH6 387 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 DNAJC15Q9Y5T4 150 aa11.83□□□□□ -0.52
C9orf3-203ENST00000375315 GSTA4O15217 222 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 INPPL1O15357 1258 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 CXCL14O95715 111 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 C1RP00736 705 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DNTTP04053 509 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 LTA4HP09960 611 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 HAPLN1P10915 354 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 CA5AP35218 305 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DCTP40126 519 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 PIK3CBP42338 1070 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 POU4F1Q01851 419 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 CTBP1Q13363 440 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 LAPTM5Q13571 262 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MRPL58Q14197 206 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 ALFQ53S48 1182 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DENND1CQ8IV53 801 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 OR10Z1Q8NGY1 313 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DACT3Q96B18 629 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MYEOVQ96EZ4 313 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 SLC47A1Q96FL8 570 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 PDLIM5Q96HC4 596 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 ACTR8Q9H981 624 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 PRDM8Q9NQV8 689 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DYRK4Q9NR20 520 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 TLR8Q9NR97 1041 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 INTS7Q9NVH2 962 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms