RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ARVCFO00192 962 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 FOXD2O60548 495 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 MTX2O75431 263 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ECDO95905 644 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 XKP51811 444 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 OAFQ86UD1 273 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ANKFN1Q8N957 763 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ZMIZ2Q8NF64 920 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 DNASE1L2Q92874 299 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PEX13Q92968 403 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TUBA1CQ9BQE3 449 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 BRINP2Q9C0B6 783 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TRIT1Q9H3H1 467 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TM9SF3Q9HD45 589 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SPATA7Q9P0W8 599 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PHF11Q9UIL8 331 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 RNF6Q9Y252 685 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ZCWPW2A0A1B0GU75 182 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 GTPBP1O00178 669 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 CLDN7O95471 211 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 CDK6Q00534 326 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 GRIK2Q13002 908 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 SLBPQ14493 270 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 HACD2Q6Y1H2 254 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 SNX33Q8WV41 574 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 FAM120CQ9NX05 1096 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 MRPS33Q9Y291 106 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PRAMEF33A0A0G2JMD5 474 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 CAPN14A8MX76 684 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 G3V2L1 256 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 DFNA5O60443 496 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PRAMEF10O60809 474 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 SORBS2O94875 1100 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PSKH1P11801 424 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 CTNNB1P35222 781 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 RAPSNQ13702 412 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF311Q5JNZ3 666 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PARGQ86W56 976 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 OR5AK3PQ8NH89 298 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 HTATIP2Q9BUP3 242 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 STOML2Q9UJZ1 356 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 IKZF2Q9UKS7 526 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 DNAJC15Q9Y5T4 150 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PTGDR2Q9Y5Y4 395 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 TRBC2A0A5B9 178 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 EDIL3O43854 480 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 S1PR4O95977 384 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 LAG3P18627 525 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 IDSP22304 550 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 SLC6A4P31645 630 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 CRISP3P54108 245 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 OR8J3Q8NGG0 315 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 TMEM203Q969S6 136 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 TP53INP1Q96A56 240 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 BIRC8Q96P09 236 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 TRNT1Q96Q11 434 aaKnown RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-203ENST00000375274 AIG1Q9NVV5 245 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 FBXW2Q9UKT8 454 aa11.25□□□□□ -0.61
PTCH1-203ENST00000375274 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 GCAP28676 217 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 DSTNP60981 165 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 PHC1P78364 1004 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SCAPQ12770 1279 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ADGRG2Q8IZP9 1017 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ARFGAP1Q8N6T3 406 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ITFG2Q969R8 447 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 OR51V1Q9H2C8 321 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ITM2CQ9NQX7 267 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 NLE1Q9NVX2 485 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MYH13Q9UKX3 1938 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 LRRC14BA6NHZ5 514 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TLR4O00206 839 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SOCS2O14508 198 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 DNAJB5O75953 348 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TSTQ16762 297 aaKnown RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TMEM44Q2T9K0 475 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SPIN4Q56A73 249 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SMARCD3Q6STE5 483 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 UMODL1-AS1Q8N2C9 162 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 NPWQ8N729 165 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SUN5Q8TC36 379 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 GSDMCQ9BYG8 508 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 PCDHB3Q9Y5E6 796 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 LRP6O75581 1613 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms