RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PIM3Q86V86 326 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 DSELQ8IZU8 1212 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 NAGSQ8N159 534 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 FBXO39Q8N4B4 442 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 Q8N9G6 341 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 PCYOX1LQ8NBM8 494 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 C2CD4AQ8NCU7 369 aaPredicted RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 GPR26Q8NDV2 337 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 IPMKQ8NFU5 416 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 TSPEARQ8WU66 669 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 SNRNP27Q8WVK2 155 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 NCSTNQ92542 709 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 GLYATL1Q969I3 302 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 SH3KBP1Q96B97 665 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 MAELQ96JY0 434 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 CMKLR1Q99788 373 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 HAUS8Q9BT25 410 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 DPH1Q9BZG8 443 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM15Q9C019 465 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 ZCCHC2Q9C0B9 1178 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 POPDC3Q9HBV1 291 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 UBP1Q9NZI7 540 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 PKP3Q9Y446 797 aa10.11□□□□□ -0.79
COL5A1-202ENST00000371820 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
COL5A1-202ENST00000371820 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 KIR2DS5A0A0G2JLQ3 304 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 A0A0G2JNG1 304 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 FAM95CA0A1B0GW59 222 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PMS2P1A4D2B8 440 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CDRT15L2A8MXV6 281 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 TARM1B6A8C7 271 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 KIR2DS3K7RE56 304 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 AIM2O14862 343 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PLD2O14939 933 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CASC3O15234 703 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 GRID2O43424 1007 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 NUAK1O60285 661 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 TNFSF15O95150 251 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 ZIC2O95409 532 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 LTA4HP09960 611 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PIRTP0C851 137 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 ALDH4A1P30038 563 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SPAM1P38567 509 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 LEPRP48357 1165 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PPM1FP49593 454 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 NUDT2P50583 147 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CLCNKAP51800 687 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 NAGLUP54802 743 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 GPLD1P80108 840 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 B4GALNT1Q00973 533 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CFHR1Q03591 330 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 FOLH1Q04609 750 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 KIR2DS5Q14953 304 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PDK3Q15120 406 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SLC9B1Q4ZJI4 515 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PIGGQ5H8A4 983 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 ARHGAP40Q5TG30 622 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 NXNQ6DKJ4 435 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 NEPROQ6NW34 567 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 RANBP10Q6VN20 620 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CHST15Q7LFX5 561 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 GLT6D1Q7Z4J2 308 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CMC1Q7Z7K0 106 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 PLD6Q8N2A8 252 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SLC25A41Q8N5S1 370 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 OR10G6Q8NH81 332 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 BRSK1Q8TDC3 778 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 POP5Q969H6 163 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 ROPN1LQ96C74 230 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 MFSD3Q96ES6 412 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 WBP1Q96G27 269 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CLPTM1LQ96KA5 538 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 MRGPRX2Q96LB1 330 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SLC46A1Q96NT5 459 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 VPS35Q96QK1 796 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CDRT15Q96T59 188 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SLC38A3Q99624 504 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CCT7Q99832 543 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 HOPXQ9BPY8 73 aaPredicted RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM56Q9BRZ2 755 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SLC25A23Q9BV35 468 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 MRPS26Q9BYN8 205 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 MUC13Q9H3R2 512 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 SUCOQ9UBS9 1254 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 FBXO5Q9UKT4 447 aa10.1□□□□□ -0.79
COL5A1-202ENST00000371820 CNOT6Q9ULM6 557 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 FLNBO75369 2602 aaKnown RBP10.1□□□□□ -0.79
COL5A1-202ENST00000371820 COL6A6A6NMZ7 2263 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 KIF26BQ2KJY2 2108 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 C2orf81A6NN90 581 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 E9PBE3 544 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 KMOO15229 486 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 DUX1O43812 170 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 KLHL41O60662 606 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 KCNJ13O60928 360 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ACP5P13686 325 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 PCSK2P16519 638 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 BPIP17213 487 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 IMPDH1P20839 514 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms