RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LOC730098B7Z3J9 87 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 NT5EP21589 574 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 OXCT2Q9BYC2 517 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 I3L521 148 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 TBX18O95935 607 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 H1F0P07305 194 aaKnown RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 PIK3CBP42338 1070 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 FAM110CQ1W6H9 321 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 C1orf220Q5T0J3 134 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 FUT10Q6P4F1 479 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 RNF31Q96EP0 1072 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 MGME1Q9BQP7 344 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 IFT27Q9BW83 186 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 C12orf4Q9NQ89 552 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 UPB1Q9UBR1 384 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 XRN1Q8IZH2 1706 aaKnown RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 PLOD2O00469 737 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 CPN2P22792 545 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 BARD1Q99728 777 aaKnown RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 ZCCHC3Q9NUD5 404 aaKnown RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 HS3ST4Q9Y661 456 aa16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 COL1A1P02452 1464 aaPredicted RBP16.72■□□□□ 0.27
PTP4A1-201ENST00000370651 XKRYO14609 159 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 C6orf136Q5SQH8 315 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 FBXO42Q6P3S6 717 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 ANKFN1Q8N957 763 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 OR10H5Q8NGA6 315 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SAP18O00422 153 aaKnown RBP16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 MAGEB3O15480 346 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 HMGN1P05114 100 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 FAM163BP0C2L3 166 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 KBTBD6Q86V97 674 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC15A3Q8IY34 581 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 HERPUD2Q9BSE4 406 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 PRELID1Q9Y255 219 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 NRP1O14786 923 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 HCRTO43612 131 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SLITRK5O94991 958 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SERPINA3P01011 423 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 GDF5P43026 501 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 AP1S2P56377 157 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 CDK6Q00534 326 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC37A3Q8NCC5 494 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 UCK2Q9BZX2 261 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 SMOXQ9NWM0 555 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 HSPB11Q9Y547 144 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 RYKP34925 604 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 PLA2G16P53816 162 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 GRB14Q14449 540 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 ANKDD1AQ495B1 522 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 TECRLQ5HYJ1 363 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 CHST9Q7L1S5 443 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 TOMM5Q8N4H5 51 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 TBX5Q99593 518 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 WRAP53Q9BUR4 548 aaKnown RBP16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 ZDHHC3Q9NYG2 299 aa16.71■□□□□ 0.27
PTP4A1-201ENST00000370651 IDSP22304 550 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 PPM1AP35813 382 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 ZNF155Q12901 538 aaPredicted RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 STX12Q86Y82 276 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 OR5AK3PQ8NH89 298 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 ELAC1Q9H777 363 aaKnown RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 TLE6Q9H808 572 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 FAM120CQ9NX05 1096 aaKnown RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 ANXA2P2A6NMY6 339 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 PDCD5O14737 125 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 USP2O75604 605 aaPredicted RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 ADH1CP00326 375 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 PRLP01236 227 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 ANXA2P07355 339 aaKnown RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 HTR1EP28566 365 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 TXNL4AP83876 142 aaKnown RBP16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 SEMG2Q02383 582 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 CLEC12AQ5QGZ9 265 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 SCML4Q8N228 414 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 AQP11Q8NBQ7 271 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 CHST4Q8NCG5 386 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 MEAF6Q9HAF1 191 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 POLE4Q9NR33 117 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 SLC22A14Q9Y267 594 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 FKBP7Q9Y680 259 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 SLC38A8A6NNN8 435 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 CAPN15O75808 1086 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 HPRP00739 348 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 CHRNA1P02708 482 aa16.7■□□□□ 0.26
PTP4A1-201ENST00000370651 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms