RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 C11orf74Q86VG3 221 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 WDR20Q8TBZ3 569 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 SELENOMQ8WWX9 145 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 TAC3Q9UHF0 121 aa23.07■■□□□ 1.28
SNX3-203ENST00000368979 LSM1O15116 133 aaKnown RBP23.06■■□□□ 1.28
SNX3-203ENST00000368979 BCAT2O15382 392 aaPredicted RBP23.06■■□□□ 1.28
SNX3-203ENST00000368979 PEX11AO75192 247 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 C1GALT1C1LP0DN25 315 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 CALB2P22676 271 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 C1orf61Q13536 156 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 NAA25Q14CX7 972 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 PRRT3Q5FWE3 981 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 FRG2Q64ET8 278 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 PMS2CLQ68D20 193 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 NXPE4Q6UWF7 544 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 SPATA19Q7Z5L4 167 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 GAB3Q8WWW8 586 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 FRG2BQ96QU4 278 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 EFCAB11Q9BUY7 163 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 TAGLN3Q9UI15 199 aa23.06■■□□□ 1.28
SNX3-203ENST00000368979 OR5K4A6NMS3 321 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 ANKRD65E5RJM6 399 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 RGS14O43566 566 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 XRCC1P18887 633 aaPredicted RBP23.05■■□□□ 1.28
SNX3-203ENST00000368979 PIK3R1P27986 724 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 ATP6AP1LQ52LC2 224 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 SGO1Q5FBB7 561 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 C6orf136Q5SQH8 315 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 POT1Q9NUX5 634 aa23.05■■□□□ 1.28
SNX3-203ENST00000368979 TNRC6BQ9UPQ9 1833 aaKnown RBP23.05■■□□□ 1.28
SNX3-203ENST00000368979 KIR2DS5A0A0G2JLQ3 304 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 A0A0G2JNG1 304 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 KIR2DS3K7RE56 304 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 HNRNPCL1O60812 293 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 SLC2A4P14672 509 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 PSMB5P28074 263 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 PRDX6P30041 224 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 SHMT2P34897 504 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 CSNK1EP49674 416 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 AFF3P51826 1226 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 ERVK-8P63133 956 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 UBE2IP63279 158 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 IRX1P78414 480 aaPredicted RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 SRSF5Q13243 272 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 KIR2DS5Q14953 304 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 NR6A1Q15406 480 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 LYSMD4Q5XG99 296 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 C17orf64Q86WR6 236 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 NAGSQ8N159 534 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 SH3KBP1Q96B97 665 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 MTFMTQ96DP5 389 aaKnown RBP23.04■■□□□ 1.28
SNX3-203ENST00000368979 PPP3R2Q96LZ3 170 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 ACAT2Q9BWD1 397 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 ACPTQ9BZG2 426 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 SLC40A1Q9NP59 571 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 PCDHGA11Q9Y5H2 935 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 ABCA7Q8IZY2 2146 aa23.04■■□□□ 1.28
SNX3-203ENST00000368979 TTC28Q96AY4 2481 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 TRBV23OR9-2A0A075B6M9 112 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 NPIPB8E9PQR5 432 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PRICKLE3O43900 615 aaPredicted RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 ESRRAP11474 423 aaPredicted RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 CDH1P12830 882 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 NEK2P51955 445 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 SLBPQ14493 270 aaKnown RBP eCLIP23.03■■□□□ 1.28
SNX3-203ENST00000368979 ELOCQ15369 112 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 SMU1Q2TAY7 513 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PAGE2BQ5JRK9 111 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 DTWD2Q8NBA8 298 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 ZFPM2Q8WW38 1151 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PATE1Q8WXA2 126 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 SLC7A6OSQ96CW6 309 aaPredicted RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 PELI2Q9HAT8 420 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 GEMIN8Q9NWZ8 242 aaKnown RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 FBXO4Q9UKT5 387 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 TP53BP1Q12888 1972 aaPredicted RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 CACNA1IQ9P0X4 2223 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PRPH2P23942 346 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 PEBP1P30086 187 aaKnown RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 MRPL19P49406 292 aaKnown RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 C21orf59P57076 290 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 YBX1P67809 324 aaKnown RBP23.03■■□□□ 1.28
SNX3-203ENST00000368979 HMGCS1Q01581 520 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 LAPTM5Q13571 262 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 GSTA3Q16772 222 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 IMPG1Q17R60 797 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 AP5B1Q2VPB7 878 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 MED27Q6P2C8 311 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 THADAQ6YHU6 1953 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 AMIGO1Q86WK6 493 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 FAM129CQ86XR2 697 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 LAS2Q8IYD9 372 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 OR2A1Q8NGT9 310 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 LCN9Q8WX39 176 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 TWSG1Q9GZX9 223 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 SPNS1Q9H2V7 528 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 AIG1Q9NVV5 245 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 OR6C2Q9NZP2 312 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 CPNE7Q9UBL6 633 aa23.03■■□□□ 1.28
SNX3-203ENST00000368979 SPASTQ9UBP0 616 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms