RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 A0A0J9YVX5 310 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 OR2A25A4D2G3 310 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 VAPBO95292 243 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 ERGP11308 486 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 MGAT1P26572 445 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 CARSP49589 748 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 EMP3P54852 163 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 ADARP55265 1226 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 YBX1P67809 324 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 CDK16Q00536 496 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 KLC1Q07866 573 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 FASTKQ14296 549 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 NAA25Q14CX7 972 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 IRAK1BP1Q5VVH5 260 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 B3GNTL1Q67FW5 361 aaPredicted RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 MRNIPQ6NTE8 343 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 FBXO42Q6P3S6 717 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 CNSTQ6PJW8 725 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 SDCCAG8Q86SQ7 713 aaPredicted RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 PARP9Q8IXQ6 854 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 SPC24Q8NBT2 197 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 DNAJB14Q8TBM8 379 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 STT3BQ8TCJ2 826 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 MFSD3Q96ES6 412 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 TCF12Q99081 682 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 CRB3Q9BUF7 120 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 ZC3H7BQ9UGR2 993 aaKnown RBP15.29■□□□□ 0.04
CKS1B-202ENST00000368436 CACNA1DQ01668 2161 aa15.29■□□□□ 0.04
CKS1B-202ENST00000368436 H3BMM5 538 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 NIPSNAP2O75323 286 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 HPP00738 406 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ESR1P03372 595 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ZGLP1P0C6A0 271 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 TPSB2P20231 275 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 COL8A1P27658 744 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 CMPK1P30085 196 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 FMO4P31512 558 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ZNF169Q14929 603 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-202ENST00000368436 TPSAB1Q15661 275 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 PRTGQ2VWP7 1150 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 RNF187Q5TA31 235 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ATG9BQ674R7 924 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 OR9A1PQ8NGU1 263 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 MIEF2Q96C03 454 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 THOC3Q96J01 351 aaKnown RBP15.28■□□□□ 0.04
CKS1B-202ENST00000368436 LMF1Q96S06 567 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ZFYVE21Q9BQ24 234 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 MESP1Q9BRJ9 268 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 DPH7Q9BTV6 452 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 ZNF282Q9UDV7 671 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-202ENST00000368436 SOX13Q9UN79 622 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 CNTRLQ7Z7A1 2325 aa15.28■□□□□ 0.04
CKS1B-202ENST00000368436 NOTCH2Q04721 2471 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 MYO1CO00159 1063 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 E2F3O00716 465 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 PHF2O75151 1096 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 PSIP1O75475 530 aaKnown RBP15.27■□□□□ 0.04
CKS1B-202ENST00000368436 KLHL18O94889 574 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 DCTP40126 519 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 OCA2Q04671 838 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 MFAP5Q13361 173 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 TLR1Q15399 786 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 MUM1Q2TAK8 710 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 ANKRD20A4Q4UJ75 823 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.27■□□□□ 0.04
CKS1B-202ENST00000368436 ARMC3Q5W041 872 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 ZNF787Q6DD87 383 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 ISLR2Q6UXK2 745 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 GSTA5Q7RTV2 222 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 OTUD6BQ8N6M0 293 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 GRHL3Q8TE85 626 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 MAIP1Q8WWC4 291 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 C10orf90Q96M02 699 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 EPS8L2Q9H6S3 715 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 STOX2Q9P2F5 926 aaPredicted RBP15.27■□□□□ 0.04
CKS1B-202ENST00000368436 GALPQ9UBC7 116 aa15.27■□□□□ 0.04
CKS1B-202ENST00000368436 A0A1W2PQ72 361 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 TCRBV7S3A2A0A539 114 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ARHGEF33A8MVX0 844 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 GOLGA8KD6RF30 607 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 H0YGG7 62 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 GOLGA8TH3BQL2 631 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 MAP2K7O14733 419 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 PFDN6O15212 129 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 FGGP02679 453 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 EIF2S1P05198 315 aaKnown RBP15.26■□□□□ 0.03
CKS1B-202ENST00000368436 EDN3P14138 238 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ACPPP15309 386 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 CHRM3P20309 590 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 OGNP20774 298 aaKnown RBP15.26■□□□□ 0.03
CKS1B-202ENST00000368436 KCNJ1P48048 391 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ARF3P61204 181 aaPredicted RBP15.26■□□□□ 0.03
CKS1B-202ENST00000368436 CDC16Q13042 620 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ARHGAP19Q14CB8 494 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 ACSBG2Q5FVE4 666 aa15.26■□□□□ 0.03
CKS1B-202ENST00000368436 VWA2Q5GFL6 755 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms