RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PIKFYVEQ9Y2I7 2098 aa9.46□□□□□ -0.89
CD48-202ENST00000368046 CTAGE15A4D2H0 777 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 EIF4E1BA6NMX2 242 aaKnown RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 WIPF1O43516 503 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 CREG1O75629 220 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 TSPAN12O95859 305 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 RAB40ALP0C0E4 278 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 CTAGE8P0CG41 777 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 AGXTP21549 392 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 FDXRP22570 491 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 PTPN4P29074 926 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 RPA3P35244 121 aaPredicted RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 RORAP35398 523 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ARSFP54793 590 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 GPX6P59796 221 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ABATP80404 500 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 GUCY2DQ02846 1103 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 RELAQ04206 551 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 GPS2Q13227 327 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 DNASE1L3Q13609 305 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 NAA25Q14CX7 972 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 TBR1Q16650 682 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 DEFB110Q30KQ9 67 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 FAM214AQ32MH5 1076 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 LINC00303Q3SY05 128 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 TCTE1Q5JU00 501 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 RHBDD2Q6NTF9 364 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 C16orf46Q6P387 395 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 CTAGE6Q86UF2 777 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ZC3HC1Q86WB0 502 aaKnown RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 CCDC25Q86WR0 208 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 CTAGE4Q8IX94 777 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 LRRC56Q8IYG6 542 aaPredicted RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 SYTL1Q8IYJ3 562 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 NKAPQ8N5F7 415 aaKnown RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 CT55Q8WUE5 264 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 STARD8Q92502 1023 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ANKRD7Q92527 254 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 EXTL1Q92935 676 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 LINGO1Q96FE5 620 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 VPS39Q96JC1 886 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 MIPEPQ99797 713 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ARHGAP9Q9BRR9 750 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 MCMBPQ9BTE3 642 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 DPH7Q9BTV6 452 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ACAT2Q9BWD1 397 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 NLNQ9BYT8 704 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 TRIM54Q9BYV2 358 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 LRRC4CQ9HCJ2 640 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 MRPS30Q9NP92 439 aaKnown RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 SMYD2Q9NRG4 433 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 ADAMTS6Q9UKP5 1117 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 SNX7Q9UNH6 387 aa9.46□□□□□ -0.9
CD48-202ENST00000368046 MRPS18BQ9Y676 258 aaKnown RBP9.46□□□□□ -0.9
CD48-202ENST00000368046 IGSF10Q6WRI0 2623 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 FAM95CA0A1B0GW59 222 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 TCRBV9S1A1TA0A576 114 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 OR2A25A4D2G3 310 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 FAM159BA6NKW6 160 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 CXorf49A8MYA2 514 aaPredicted RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 CAPN1P07384 714 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 CTSBP07858 339 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 CD63P08962 238 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 SAT1P21673 171 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 PSMB5P28074 263 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 IMPA1P29218 277 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 YBX1P67809 324 aaKnown RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 DCDP81605 110 aaKnown RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 SP140Q13342 867 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 TSTA3Q13630 321 aaPredicted RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 ERV3-1Q14264 604 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 WASHC2DQ5SRD0 308 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 GRTP1Q5TC63 336 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 ICE2Q659A1 982 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 LCN10Q6JVE6 187 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 BORAQ6PGQ7 559 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 AGTRAPQ6RW13 159 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 TMEM207Q6UWW9 146 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 ZNF655Q8N720 491 aaPredicted RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 CEP112Q8N8E3 955 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 EXD3Q8N9H8 876 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 PPFIBP2Q8ND30 876 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 ZNF285Q96NJ3 590 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 OLFM1Q99784 485 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 CPNE1Q99829 537 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 C17orf62Q9BQA9 187 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 NDC1Q9BTX1 674 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 FAM129AQ9BZQ8 928 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 TSPYL1Q9H0U9 437 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 CHST8Q9H2A9 424 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 RHOJQ9H4E5 214 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 POPDC3Q9HBV1 291 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 ZDHHC18Q9NUE0 388 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 IRAK4Q9NWZ3 460 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 UTP6Q9NYH9 597 aaKnown RBP9.45□□□□□ -0.9
CD48-202ENST00000368046 TXNDC16Q9P2K2 825 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 ANKMY1Q9P2S6 941 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 TAC3Q9UHF0 121 aa9.45□□□□□ -0.9
CD48-202ENST00000368046 DMGDHQ9UI17 866 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms