RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PCDHGA11Q9Y5H2 935 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 LRRC14BA6NHZ5 514 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMEM233B4DJY2 109 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 EI24O14681 340 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RNASEH2AO75792 299 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RLN1P04808 185 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 THEGLP0DJG4 465 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 CTPS1P17812 591 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 PRPS1L1P21108 318 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 XKR6Q5GH73 641 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MSANTD1Q6ZTZ1 278 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 GOLGA7Q7Z5G4 137 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLAIN1Q8ND83 568 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR4F6Q8NGB9 312 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZFP28Q8NHY6 868 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MAPK15Q8TD08 544 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMEM40Q8WWA1 233 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 C12orf43Q96C57 262 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TM6SF2Q9BZW4 377 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 KAT8Q9H7Z6 458 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 KLHL28Q9NXS3 571 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MTRRQ9UBK8 725 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 GRIP1Q9Y3R0 1128 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SUV39H1O43463 412 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 CKMT2P17540 419 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARHGDIBP52566 201 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RABGGTBP53611 331 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SP140Q13342 867 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MAB21L1Q13394 359 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TUBB3Q13509 450 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SETMARQ53H47 684 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLITRK4Q8IW52 837 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 LIX1Q8N485 282 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MGME1Q9BQP7 344 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SPATA9Q9BWV2 254 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TREM1Q9NP99 234 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 UBQLN2Q9UHD9 624 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 IRAK3Q9Y616 596 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSPE1-MOB4S4R3N1 261 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MIA3Q5JRA6 1907 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 GREB1LQ9C091 1923 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 KANTRA0A1W2PQU2 76 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 FABP12A6NFH5 140 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 PGRMC2O15173 223 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MRPS14O60783 128 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 XYLBO75191 536 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 CNTN5O94779 1100 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ACVRL1P37023 503 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARCN1P48444 511 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 WSCD2Q2TBF2 565 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 PIK3R6Q5UE93 754 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 UGT2A3Q6UWM9 527 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 PTCHD4Q6ZW05 846 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ITPKCQ96DU7 683 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 C11orf24Q96F05 449 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 MS4A4AQ96JQ5 239 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPM1MQ96MI6 270 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 CNPPD1Q9BV87 410 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ANKRD60Q9BZ19 345 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RIMS3Q9UJD0 308 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SBF2Q86WG5 1849 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ANKDD1BA6NHY2 528 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARVCFO00192 962 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 B3GALNT1O75752 331 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ALDH4A1P30038 563 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RFC2P35250 354 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 DCDC1P59894 354 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 RPA4Q13156 261 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 TLR1Q15399 786 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 C10orf62Q5T681 223 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF773Q6PK81 442 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 LARP4Q71RC2 724 aaKnown RBP eCLIP5.24□□□□□ -1.573e-6■■□□□ 13.3
CDC42BPA-204ENST00000366767 ADCK2Q7Z695 626 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 C11orf96Q7Z7L8 435 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC15A3Q8IY34 581 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 GPR152Q8TDT2 470 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF350Q9GZX5 532 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 FAIMQ9NVQ4 179 aa5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 SAMHD1Q9Y3Z3 626 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-204ENST00000366767 FFAR3O14843 346 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 AURKAO14965 403 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 GPR42O15529 346 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 ANGPTL1O95841 491 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 GPC1P35052 558 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMBIM6P55061 237 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 GRM2Q14416 872 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 PCBP2Q15366 365 aaKnown RBP eCLIP5.23□□□□□ -1.572e-6■■■■■ 64
CDC42BPA-204ENST00000366767 C6orf136Q5SQH8 315 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 CHSY3Q70JA7 882 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 TRMT11Q7Z4G4 463 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 TEX26Q8N6G2 289 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 VANGL1Q8TAA9 524 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 TEX47Q8TBZ9 253 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 BIRC7Q96CA5 298 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 CMTM7Q96FZ5 175 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 CRELD1Q96HD1 420 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 DHRS1Q96LJ7 313 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 PRICKLE1Q96MT3 831 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZDHHC6Q9H6R6 413 aa5.23□□□□□ -1.57
CDC42BPA-204ENST00000366767 NMUR1Q9HB89 426 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms