RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 DNASE1L3Q13609 305 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 EFTUD2Q15029 972 aaKnown RBP eCLIP14.93□□□□□ -0.021e-12■■■■■ 43.4
MRPL55-215ENST00000366742 SOWAHCQ53LP3 525 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ZC3H12BQ5HYM0 836 aaKnown RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ICE2Q659A1 982 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ZNF425Q6IV72 752 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 RHBDD2Q6NTF9 364 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 FBXO42Q6P3S6 717 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 TLDC1Q6P9B6 456 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 SBSNQ6UWP8 590 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 RNF44Q7L0R7 432 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 CTAGE3PQ8IX95 158 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 GPR135Q8IZ08 494 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ZNF655Q8N720 491 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 PPM1NQ8N819 430 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 IFT81Q8WYA0 676 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 STARD8Q92502 1023 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ANKRD7Q92527 254 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 N4BP2L2Q92802 583 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 MR1Q95460 341 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 DPH7Q9BTV6 452 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 CHST8Q9H2A9 424 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 CAB39LQ9H9S4 337 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 POPDC3Q9HBV1 291 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 MRPS30Q9NP92 439 aaKnown RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 NINJ2Q9NZG7 142 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ANKMY1Q9P2S6 941 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 AP1M2Q9Y6Q5 423 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 PCM1Q15154 2024 aa14.93□□□□□ -0.02
MRPL55-215ENST00000366742 SMG1Q96Q15 3661 aaKnown RBP14.93□□□□□ -0.02
MRPL55-215ENST00000366742 ATRXP46100 2492 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 ERVH48-1M5A8F1 160 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 KLK3P07288 261 aaPredicted RBP14.92□□□□□ -0.02
MRPL55-215ENST00000366742 HBQ1P09105 142 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 ABATP80404 500 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 NAB1Q13506 487 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 TSTA3Q13630 321 aaPredicted RBP14.92□□□□□ -0.02
MRPL55-215ENST00000366742 NAA25Q14CX7 972 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 ZKSCAN8Q15776 578 aaPredicted RBP14.92□□□□□ -0.02
MRPL55-215ENST00000366742 PPP1R3AQ16821 1122 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 PTCHD3Q3KNS1 767 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 CRTC2Q53ET0 693 aaPredicted RBP14.92□□□□□ -0.02
MRPL55-215ENST00000366742 GRTP1Q5TC63 336 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 FRMPD2BQ6IN97 320 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 AGTRAPQ6RW13 159 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 FAM198BQ6UWH4 519 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 PAQR7Q86WK9 346 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 LRRN4CLQ8ND94 238 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 CLIP3Q96DZ5 547 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 GBP5Q96PP8 586 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 FMO2Q99518 471 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 PLCD4Q9BRC7 762 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 SGPP1Q9BX95 441 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 FUT8Q9BYC5 575 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 SYNPO2LQ9H987 977 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 TXNDC16Q9P2K2 825 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 KCND3Q9UK17 655 aa14.92□□□□□ -0.02
MRPL55-215ENST00000366742 NOVA2Q9UNW9 492 aaKnown RBP14.92□□□□□ -0.02
MRPL55-215ENST00000366742 FER1L5A0AVI2 2057 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 ANKRD12Q6UB98 2062 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 HEATR5BQ9P2D3 2071 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 LOC105369274A0A096LPK9 316 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 LOC102723532A0A0G2JNH3 316 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 FITM1A5D6W6 292 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 CDC7O00311 574 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 ATXN7O15265 892 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 SRPX2O60687 465 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 CCNDBP1O95273 360 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 ITGB2P05107 769 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 ENO2P09104 434 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 SPRP35270 261 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 AP1S2P56377 157 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 TBPL1P62380 186 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 NAE1Q13564 534 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 COL9A2Q14055 689 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 USP10Q14694 798 aaKnown RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 LINC00303Q3SY05 128 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 CEP128Q6ZU80 1094 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 OR4N4Q8N0Y3 316 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 FBXL8Q96CD0 374 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 TSPAN17Q96FV3 270 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 WBP1Q96G27 269 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 GPR87Q9BY21 358 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 TSPYL1Q9H0U9 437 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 ATG10Q9H0Y0 220 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 L2HGDHQ9H9P8 463 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 GPAMQ9HCL2 828 aa14.91□□□□□ -0.02
MRPL55-215ENST00000366742 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 CUEDC1Q9NWM3 386 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-215ENST00000366742 A0A0J9YVX5 310 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 NPEPPSL1A6NEC2 478 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 PHGDHO43175 533 aaKnown RBP14.9□□□□□ -0.02
MRPL55-215ENST00000366742 KATNA1O75449 491 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 RECKO95980 971 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 RAB40ALP0C0E4 278 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 HIST1H2AGP0C0S8 130 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-215ENST00000366742 HIST1H2ADP20671 130 aa14.9□□□□□ -0.02
MRPL55-215ENST00000366742 PTPN4P29074 926 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms