RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 RBM5P52756 815 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 EIF5P55010 431 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 MAZP56270 477 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 AP2B1P63010 937 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 CXCL6P80162 114 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 OVGP1Q12889 678 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TMEM132DQ14C87 1099 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 HERC3Q15034 1050 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 RNPS1Q15287 305 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 CCDC14Q49A88 953 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARHGAP29Q52LW3 1261 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 C6orf141Q5SZD1 244 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TMEM198Q66K66 360 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TXNDC8Q6A555 127 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 LEKR1Q6ZMV7 388 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 Q6ZSA8 131 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF695Q8IW36 515 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC44A2Q8IWA5 706 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 GPC2Q8N158 579 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 FBXO30Q8TB52 745 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 HM13Q8TCT9 377 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 SPIN2AQ99865 258 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 SPIN2BQ9BPZ2 258 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TMEM47Q9BQJ4 181 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 S1PR5Q9H228 398 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 MOB1AQ9H8S9 216 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 IL1RAPL1Q9NZN1 696 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 CACNG4Q9UBN1 327 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 DDX20Q9UHI6 824 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 OSGIN1Q9UJX0 560 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 MRPL11Q9Y3B7 192 aaKnown RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRKAB1Q9Y478 270 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 TMEM184BQ9Y519 407 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 SPIN1Q9Y657 262 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 COL6A6A6NMZ7 2263 aa-0.53□□□□□ -2.49
RNU6-340P-201ENST00000364005 CFAP65Q6ZU64 1925 aaKnown RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 COL27A1Q8IZC6 1860 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 UTYO14607 1347 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SALL1Q9NSC2 1324 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 ELOVL7A1L3X0 281 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 AQP12BA6NM10 295 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 CCT8L1PA6NM43 557 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 C16orf90A8MZG2 172 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SNURFLB1AK76 121 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 TMEM189-UBE2V1I3L0A0 370 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 GAPDHSO14556 408 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 TEX28O15482 410 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 ZNF749O43361 778 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 PLA2G6O60733 806 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 WDHD1O75717 1129 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 FGF18O76093 207 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 HSPB1P04792 205 aaKnown RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 GALTP07902 379 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 MYOGP15173 224 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 HSPA4P34932 840 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 PTGER4P35408 488 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SLC1A4P43007 532 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 RPS10P46783 165 aaKnown RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 FNTAP49354 379 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 PNLIPRP1P54315 467 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 RIPPLY3P57055 190 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 CX3CL1P78423 397 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 ZNF45Q02386 682 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 FOXO1Q12778 655 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SLAQ13239 276 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 UBE2V1Q13404 147 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 HERPUD1Q15011 391 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 TGIF1Q15583 401 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 LETM2Q2VYF4 491 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 COBLL1Q53SF7 1204 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 NHSL2Q5HYW2 709 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 DENND1BQ6P3S1 775 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 LINC01551Q86U37 167 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 OR52N5Q8NH56 324 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 STYXQ8WUJ0 223 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SREK1Q8WXA9 508 aaKnown RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 JAKMIP2Q96AA8 810 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 TBC1D20Q96BZ9 403 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SPATA17Q96L03 361 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 LINC00477Q96M19 166 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 CCT8L2Q96SF2 557 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 GFI1Q99684 422 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 PI4K2AQ9BTU6 479 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 OSBPL11Q9BXB4 747 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 HEMGNQ9BXL5 484 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 STRADBQ9C0K7 418 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 NMUR2Q9GZQ4 415 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 TMEM39BQ9GZU3 492 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SLA2Q9H6Q3 261 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 SLC28A3Q9HAS3 691 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 IL1RAPQ9NPH3 570 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 COPG2Q9UBF2 871 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 PRG3Q9Y2Y8 225 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 CEP83Q9Y592 693 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 CHD4Q14839 1912 aa-0.54□□□□□ -2.5
RNU6-340P-201ENST00000364005 IL16Q14005 1332 aa-0.55□□□□□ -2.5
RNU6-340P-201ENST00000364005 FAM90A7PA6NKC0 464 aa-0.55□□□□□ -2.5
RNU6-340P-201ENST00000364005 FAM90A22PA8MWA6 464 aa-0.55□□□□□ -2.5
RNU6-340P-201ENST00000364005 FAM90A12PA8MX19 464 aa-0.55□□□□□ -2.5
RNU6-340P-201ENST00000364005 FAM90A23PA8MXZ1 464 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms