RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MSRB3Q8IXL7 192 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 RNF175Q8N4F7 328 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 VN1R2Q8NFZ6 395 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 APIPQ96GX9 242 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 OSBPL6Q9BZF3 934 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 IKZF5Q9H5V7 419 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 SLC25A37Q9NYZ2 338 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 DEAF1O75398 565 aaPredicted RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 PRNPP04156 253 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 RAP2AP10114 183 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 GGT1P19440 569 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 TACR1P25103 407 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 MAP4P27816 1152 aaKnown RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 PHC1P78364 1004 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 RAB39AQ14964 217 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 FRG2Q64ET8 278 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 TMEM220Q6QAJ8 160 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 AADATQ8N5Z0 425 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 DTD2Q96FN9 168 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 CNDP2Q96KP4 475 aaKnown RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 CCDC115Q96NT0 180 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 FRG2BQ96QU4 278 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 OR52E6Q96RD3 313 aa21.94■■□□□ 1.1
LDB1-201ENST00000361198 SOX17Q9H6I2 414 aaPredicted RBP21.94■■□□□ 1.1
LDB1-201ENST00000361198 SLC5A10A0PJK1 596 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 ANXA6P08133 673 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 CD22P20273 847 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 PRPH2P23942 346 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 ALDH3A2P51648 485 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 ARSFP54793 590 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 FNDC3BQ53EP0 1204 aaKnown RBP21.93■■□□□ 1.1
LDB1-201ENST00000361198 C9orf64Q5T6V5 341 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 CYP2U1Q7Z449 544 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 CROCCP3Q8IVE0 287 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 NPAS3Q8IXF0 933 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 NRSN1Q8IZ57 195 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 TERB1Q8NA31 727 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 GLMNQ92990 594 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 ARRDC3Q96B67 414 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 COQ10AQ96MF6 247 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 TSSK3Q96PN8 268 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 TUBA1CQ9BQE3 449 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 CCM2Q9BSQ5 444 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 C2orf16Q68DN1 1984 aa21.93■■□□□ 1.1
LDB1-201ENST00000361198 PSMD11O00231 422 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 SOD1P00441 154 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 JUPP14923 745 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 PDHA2P29803 388 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 CLDN8P56748 225 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 GPM6BQ13491 265 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 SLC22A15Q8IZD6 547 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 CMTM7Q96FZ5 175 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 ASB16Q96NS5 453 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 PHF12Q96QT6 1004 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 THUMPD3Q9BV44 507 aaKnown RBP21.92■■□□□ 1.1
LDB1-201ENST00000361198 GORASP2Q9H8Y8 452 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 POLR1BQ9H9Y6 1135 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 DEC1Q9P2X7 70 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 GULP1Q9UBP9 304 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.92■■□□□ 1.1
LDB1-201ENST00000361198 PLK4O00444 970 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 ALBP02768 609 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 PBLDP30039 288 aaPredicted RBP21.92■■□□□ 1.1
LDB1-201ENST00000361198 STT3AP46977 705 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 IRF8Q02556 426 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 KCNC3Q14003 757 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 HNRNPA1L2Q32P51 320 aaKnown RBP21.92■■□□□ 1.1
LDB1-201ENST00000361198 GTDC1Q4AE62 458 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 TRIM74Q86UV6 250 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 THOC6Q86W42 341 aaKnown RBP21.92■■□□□ 1.1
LDB1-201ENST00000361198 OR10A6Q8NH74 314 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 SLC6A13Q9NSD5 602 aa21.92■■□□□ 1.1
LDB1-201ENST00000361198 H3BMQ9 156 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 K7ESM1 405 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 ATE1O95260 518 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 ALPLP05186 524 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 PRPS2P11908 318 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 SDC1P18827 310 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 BDKRB1P46663 353 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 CYP4F3Q08477 520 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 DAG1Q14118 895 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 FAM98BQ52LJ0 330 aaKnown RBP21.91■■□□□ 1.1
LDB1-201ENST00000361198 TMEM214Q6NUQ4 689 aaKnown RBP21.91■■□□□ 1.1
LDB1-201ENST00000361198 AGTRAPQ6RW13 159 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 KCTD8Q6ZWB6 473 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 EGLN2Q96KS0 407 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 APOLD1Q96LR9 279 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 COG8Q96MW5 612 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 PLGRKTQ9HBL7 147 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 STOX2Q9P2F5 926 aaPredicted RBP21.91■■□□□ 1.1
LDB1-201ENST00000361198 NFATC1O95644 943 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 CPNE6O95741 557 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 ITGB7P26010 798 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 GRSF1Q12849 480 aaKnown RBP eCLIP21.91■■□□□ 1.1
LDB1-201ENST00000361198 NAE1Q13564 534 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 PLCL1Q15111 1095 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 OTUD3Q5T2D3 398 aaPredicted RBP21.91■■□□□ 1.1
LDB1-201ENST00000361198 OR2T12Q8NG77 320 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 TMBIM1Q969X1 311 aa21.91■■□□□ 1.1
LDB1-201ENST00000361198 MED8Q96G25 268 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms