RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HOXA6P31267 233 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HNRNPH1P31943 449 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ACADVLP49748 655 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RAB28P51157 221 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 EMX2Q04743 252 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GRIK2Q13002 908 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 TSTA3Q13630 321 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CYLC2Q14093 348 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MAPRE2Q15555 327 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 IMPG1Q17R60 797 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SGO1Q5FBB7 561 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 ATG9BQ674R7 924 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SUSD1Q6UWL2 747 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FNDC5Q8NAU1 212 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CCL4L1Q8NHW4 92 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HMGCLL1Q8TB92 370 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 HBEGFQ99075 208 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 EFCAB11Q9BUY7 163 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KIR3DX1Q9H7L2 352 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 AIG1Q9NVV5 245 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SLCO1B1Q9Y6L6 691 aa20.28■□□□□ 0.84
MAP1LC3A-201ENST00000360668 LOC100653049A0A140TA62 436 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 A0A1W2PR77 199 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 A6NCN8 305 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MEI4A8MW99 385 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 NPIPB8E9PQR5 432 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KRT34O76011 436 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GPX3P22352 226 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PKLRP30613 574 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 BLKP51451 505 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RACK1P63244 317 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 KIF19Q2TAC6 998 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 AP5B1Q2VPB7 878 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 THEMIS2Q5TEJ8 643 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SLC30A9Q6PML9 568 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 TMPRSS11BQ86T26 416 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PARGQ86W56 976 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SNX32Q86XE0 403 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MIER2Q8N344 545 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 FBXL6Q8N531 539 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 DEFB119Q8N690 84 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 LMNTD1Q8N9Z9 388 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RBM15BQ8NDT2 890 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 MCUR1Q96AQ8 359 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 RTKNQ9BST9 563 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GSDMCQ9BYG8 508 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 BRINP2Q9C0B6 783 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 SDR39U1Q9NRG7 319 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 PCDHGA11Q9Y5H2 935 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 GPR45Q9Y5Y3 372 aa20.27■□□□□ 0.84
MAP1LC3A-201ENST00000360668 CCDC163A0A0D9SF12 145 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 EML2O95834 649 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PDGFBP01127 241 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C1GALT1C1LP0DN25 315 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PRPH2P23942 346 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CD38P28907 300 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RAP1GDS1P52306 607 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MAD2L1Q13257 205 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 LAPTM5Q13571 262 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SNCBQ16143 134 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 AGKQ53H12 422 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C10orf62Q5T681 223 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NXPE4Q6UWF7 544 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PACS2Q86VP3 889 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR2L8Q8NGY9 312 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 WDR20Q8TBZ3 569 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MTFMTQ96DP5 389 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ACPTQ9BZG2 426 aa20.26■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MAP3K13O43283 966 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RSL1D1O76021 490 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ATP6V1G2O95670 118 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 F3P13726 295 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 VARSP26640 1264 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CPOXP36551 454 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PGM1P36871 562 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 DIO3P55073 304 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HMGCS1Q01581 520 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CSTF3Q12996 717 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RPS6KA2Q15349 733 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PAGE2BQ5JRK9 111 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PHACTR4Q8IZ21 702 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FAM13CQ8NE31 585 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR52E1Q8NGJ3 308 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 REPS1Q96D71 796 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HSPA12BQ96MM6 686 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 LRTM1Q9HBL6 345 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TMEM45AQ9NWC5 275 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KLF15Q9UIH9 416 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SH2B3Q9UQQ2 575 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 EML5Q05BV3 1969 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 A0A1W2PPV9 198 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 WNT1P04628 370 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HSD3B1P14060 373 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CD1EP15812 388 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HSD3B2P26439 372 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NEK2P51955 445 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MXRA7P84157 204 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PDCD4Q53EL6 469 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CATSPEREQ5SY80 951 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MED27Q6P2C8 311 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms