RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 GATA5Q9BWX5 397 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 PITPNM3Q9BZ71 974 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 ABCG4Q9H172 646 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 DNAJC11Q9NVH1 559 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 OPTCQ9UBM4 332 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 TAC3Q9UHF0 121 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 PCTPQ9UKL6 214 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 PCDHGA1Q9Y5H4 931 aa11.97□□□□□ -0.49
NIF3L1-201ENST00000359683 GSAPA4D1B5 854 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 WDR91A4D1P6 747 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CAPN5O15484 640 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CPNE6O95741 557 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 C9P02748 559 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 RPLP0P05388 317 aaKnown RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 UGT2B7P16662 529 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 EPORP19235 508 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PSMB5P28074 263 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CSF2RBP32927 897 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 NAA20P61599 178 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PPP1CAP62136 330 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 ABATP80404 500 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PCDH1Q08174 1060 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CDC16Q13042 620 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 TSTA3Q13630 321 aaPredicted RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 SF1Q15637 639 aaKnown RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 SLC5A12Q1EHB4 618 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 THEMIS2Q5TEJ8 643 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 ICE2Q659A1 982 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 TMEM71Q6P5X7 295 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 SPESP1Q6UW49 350 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PLXDC1Q8IUK5 500 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 DEFB124Q8NES8 71 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 OR2L3Q8NG85 312 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 WDR48Q8TAF3 677 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 MOCOSQ96EN8 888 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 ZDHHC12Q96GR4 267 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CD180Q99467 661 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 DPYSL5Q9BPU6 564 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PAIP2Q9BPZ3 127 aaKnown RBP11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 CAPS2Q9BXY5 557 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 TOR4AQ9NXH8 423 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 GPRC5BQ9NZH0 403 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 PDP2Q9P2J9 529 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 KCNE2Q9Y6J6 123 aa11.96□□□□□ -0.5
NIF3L1-201ENST00000359683 MN1Q10571 1320 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 SUPT7LO94864 414 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 EPB42P16452 691 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 PIK3CGP48736 1102 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 NOVA1P51513 510 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 E2F1Q01094 437 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 CLCQ05315 142 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 GTF2H2Q13888 395 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 PDK4Q16654 411 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 GTF2H2CQ6P1K8 395 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ZNF574Q6ZN55 896 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 GOLGA7Q7Z5G4 137 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 CCNYL1Q8N7R7 359 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 SREK1Q8WXA9 508 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 NSUN5Q96P11 429 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ACAT2Q9BWD1 397 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 GSTO2Q9H4Y5 243 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ZBTB26Q9HCK0 441 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ACSS2Q9NR19 701 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 C1GALT1Q9NS00 363 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ABCF3Q9NUQ8 709 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 INTS9Q9NV88 658 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 SEMA5BQ9P283 1151 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 ATXN7L1Q9ULK2 861 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 SH2B3Q9UQQ2 575 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 KLK4Q9Y5K2 254 aa11.95□□□□□ -0.5
NIF3L1-201ENST00000359683 NPHS1O60500 1241 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 PRAMEF4O60810 478 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 H2AFYO75367 372 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 RFPL3O75679 317 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 DKK1O94907 266 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 CCNDBP1O95273 360 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 CDK4P11802 303 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 CEACAM1P13688 526 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 GNAZP19086 355 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 BGNP21810 368 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 CMPK1P30085 196 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 LSSP48449 732 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 ATP1A2P50993 1020 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 CDH13P55290 713 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 GFERP55789 205 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 E2F2Q14209 437 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 PRAMEF9Q5VWM5 478 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 KIAA1614Q5VZ46 1190 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 IRGCQ6NXR0 463 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 RPS27LQ71UM5 84 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 TMPRSS9Q7Z410 1059 aa11.94□□□□□ -0.5
NIF3L1-201ENST00000359683 C17orf64Q86WR6 236 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms