RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ZNF548Q8NEK5 533 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 OR52E4Q8NGH9 312 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 WDR20Q8TBZ3 569 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 NUDT8Q8WV74 236 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 POP5Q969H6 163 aaKnown RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 RAB7BQ96AH8 199 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 APIPQ96GX9 242 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 LINC00615Q96LM1 132 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 FAM129BQ96TA1 746 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 PKP4Q99569 1192 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CDCA3Q99618 268 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CPPED1Q9BRF8 314 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 HDAC8Q9BY41 377 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 PAIP1Q9H074 479 aaKnown RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 GORASP2Q9H8Y8 452 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 BRF2Q9HAW0 419 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 SLC25A37Q9NYZ2 338 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 SOCS2O14508 198 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 NPC1O15118 1278 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 TPST1O60507 370 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 RASAL1O95294 804 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 LDLRP01130 860 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CKMT2P17540 419 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CD22P20273 847 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 C21orf58P58505 322 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 MYBPC1Q00872 1141 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 DOC2AQ14183 400 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 E2F2Q14209 437 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 NOXRED1Q6NXP6 359 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 TRAPPC5Q8IUR0 188 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 RIMKLAQ8IXN7 391 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CBR4Q8N4T8 237 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 LILRA3Q8N6C8 439 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CXorf40AQ8TE69 158 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 STARD8Q92502 1023 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 SUSD6Q92537 303 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 NELL1Q92832 810 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 MED8Q96G25 268 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 APOLD1Q96LR9 279 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 TSSK3Q96PN8 268 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 THUMPD3Q9BV44 507 aaKnown RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 MRPS26Q9BYN8 205 aaKnown RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 ANKRD60Q9BZ19 345 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 TRIM39Q9HCM9 518 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 SPATA6Q9NWH7 488 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 PADI4Q9UM07 663 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 RUVBL1Q9Y265 456 aaKnown RBP14.44□□□□□ -0.1
GABPB1-202ENST00000359031 AK5Q9Y6K8 562 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 CHD7Q9P2D1 2997 aa14.44□□□□□ -0.1
GABPB1-202ENST00000359031 XIRP2A4UGR9 3374 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 C17orf113A0A1B0GUU1 675 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 ARHGAP10A1A4S6 786 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 GSTA4O15217 222 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 VEGFDO43915 354 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 SCELO95171 688 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 C1orf105O95561 183 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 SLC16A8O95907 504 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 HOXB9P17482 250 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-202ENST00000359031 PRPS1L1P21108 318 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 PLIN5Q00G26 463 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 MTAPQ13126 283 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 CCSMST1Q4G0I0 132 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 LIN52Q52LA3 116 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 FAM98BQ52LJ0 330 aaKnown RBP14.43□□□□□ -0.1
GABPB1-202ENST00000359031 C10orf62Q5T681 223 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-202ENST00000359031 FOXB2Q5VYV0 432 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 DNAJC14Q6Y2X3 702 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-202ENST00000359031 HM13Q8TCT9 377 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 OR4K3Q96R72 315 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 UGT2B28Q9BY64 529 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 OR2AG1Q9H205 316 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 PIF1Q9H611 641 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 SERHLQ9NQF3 203 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 THAP10Q9P2Z0 257 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-202ENST00000359031 VPS29Q9UBQ0 182 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 PPT2Q9UMR5 302 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 GPR34Q9UPC5 381 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 MAPRE3Q9UPY8 281 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 PCDHGA11Q9Y5H2 935 aa14.43□□□□□ -0.1
GABPB1-202ENST00000359031 MYO7AQ13402 2215 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 ELOVL7A1L3X0 281 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 FAM149AA5PLN7 773 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 MMP20O60882 483 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 GPR37L1O60883 481 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 MYO1DO94832 1006 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 RAP2AP10114 183 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 HOXB6P17509 224 aaKnown RBP14.42□□□□□ -0.1
GABPB1-202ENST00000359031 PAX7P23759 505 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 TACR1P25103 407 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 OPRD1P41143 372 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 EIF2DP41214 584 aaKnown RBP14.42□□□□□ -0.1
GABPB1-202ENST00000359031 IL12RB1P42701 662 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 FCHO2Q0JRZ9 810 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 PLA2G4EQ3MJ16 856 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 NHSL2Q5HYW2 709 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 FAM46CQ5VWP2 391 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 CAPN13Q6MZZ7 669 aaPredicted RBP14.42□□□□□ -0.1
GABPB1-202ENST00000359031 VITQ6UXI7 678 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 FKBP9P1Q75LS8 142 aa14.42□□□□□ -0.1
GABPB1-202ENST00000359031 GPR149Q86SP6 731 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms