RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ST3GAL4Q11206 333 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 HSDL1Q3SXM5 330 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NOXA1Q86UR1 476 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NXPE2Q96DL1 559 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ZSWIM3Q96MP5 696 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 UCK2Q9BZX2 261 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHB16Q9NRJ7 776 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SMOXQ9NWM0 555 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 QPCTLQ9NXS2 382 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SLC25A14O95258 325 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TAS2R10Q9NYW0 307 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SOCS2O14508 198 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TPST2O60704 377 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PEX14O75381 377 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PRPS1L1P21108 318 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 OPRL1P41146 370 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 KHKP50053 298 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PSMA6P60900 246 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SGCGQ13326 291 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 UGT8Q16880 541 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C6orf141Q5SZD1 244 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C17orf64Q86WR6 236 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PCDH19Q8TAB3 1148 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SPATC1LQ9H0A9 340 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 FAM83DQ9H4H8 585 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 METTL8Q9H825 291 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NDOR1Q9UHB4 597 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TLR6Q9Y2C9 796 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 KCNIP3Q9Y2W7 256 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 CKAP5Q14008 2032 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 C1orf196B1AJZ1 125 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PRKCHP24723 683 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SSR2P43308 183 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DSG2Q14126 1118 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 UBE2UQ5VVX9 321 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 NCEH1Q6PIU2 408 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 LDB1Q86U70 411 aaPredicted RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 PDZD9Q8IXQ8 264 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 RAVER1Q8IY67 606 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 CALML5Q9NZT1 146 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DERAQ9Y315 318 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 WEE1P30291 646 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 RGS19P49795 217 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TAS2R39P59534 338 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DNAJB13P59910 316 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 TRAPPC12Q8WVT3 735 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 DNASE1L2Q92874 299 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 MKRN2Q9H000 416 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
COL6A6-201ENST00000358511 ERVK13-1Q9NX77 482 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 SLC17A6Q9P2U8 582 aa8.57□□□□□ -1.04
COL6A6-201ENST00000358511 GTPBP1O00178 669 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CREG1O75629 220 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 URODP06132 367 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TACSTD2P09758 323 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ITPK1Q13572 414 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SCARB2Q14108 478 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TRAM1Q15629 374 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 LRRC70Q7Z2Q7 622 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PAQR7Q86WK9 346 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 OR9I1Q8NGQ6 314 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TMEM27Q9HBJ8 222 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DDX60Q8IY21 1712 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MYOCOSA0A1B0GUC4 107 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ACSL4O60488 711 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 GOT2P00505 430 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 AGTR1P30556 359 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 AIMP2Q13155 320 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 C9orf57Q5W0N0 161 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 RAP1GAP2Q684P5 730 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SAMD12Q8N8I0 201 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ABHD11Q8NFV4 315 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FAM163AQ96GL9 167 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 B3GNT5Q9BYG0 378 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 RUVBL1Q9Y265 456 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PLEKHA6Q9Y2H5 1048 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CACNA1SQ13698 1873 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MAFO75444 373 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 POMCP01189 267 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TAS2R43P59537 309 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SNTA1Q13424 505 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 LAPTM5Q13571 262 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ZC3HC1Q86WB0 502 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MARCH9Q86YJ5 346 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MYO19Q96H55 970 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 BTN2A3PQ96KV6 586 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 AIF1LQ9BQI0 150 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DUSP26Q9BV47 211 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ASPNQ9BXN1 380 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 NOP16Q9Y3C1 178 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MAGED1Q9Y5V3 778 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 HSPE1-MOB4S4R3N1 261 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 A8MT66 165 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 KCNQ2O43526 872 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms