RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PRKAA2P54646 552 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 PRDX1Q06830 199 aaKnown RBP14.33□□□□□ -0.12
CCNE1-202ENST00000357943 ICE2Q659A1 982 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 LCTLQ6UWM7 567 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 B3GNT8Q7Z7M8 397 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 SLC22A9Q8IVM8 553 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 SLITRK4Q8IW52 837 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 WDR48Q8TAF3 677 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 MGARPQ8TDB4 240 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 OXSMQ9NWU1 459 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
CCNE1-202ENST00000357943 APOBEC2Q9Y235 224 aaKnown RBP14.33□□□□□ -0.12
CCNE1-202ENST00000357943 TNPO3Q9Y5L0 923 aaKnown RBP14.33□□□□□ -0.12
CCNE1-202ENST00000357943 IGHV5-51A0A0C4DH38 117 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 IGKV1-8A0A0C4DH67 115 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 TLCD2A6NGC4 264 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 A8MU76 341 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 K7EPI3 171 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 PRAMEF10O60809 474 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 RASSF9O75901 435 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 DHRS4L1P0CG22 281 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 THRAP10827 490 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 ST6GAL1P15907 406 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CDH3P22223 829 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 ALDH3A1P30838 453 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 SLC18A1P54219 525 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
CCNE1-202ENST00000357943 HERVK_113P63132 956 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CLPPQ16740 277 aaPredicted RBP14.32□□□□□ -0.12
CCNE1-202ENST00000357943 SLC5A12Q1EHB4 618 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 ZNF678Q5SXM1 525 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CACHD1Q5VU97 1274 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 LRRC70Q7Z2Q7 622 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 RCBTB1Q8NDN9 531 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 MDM1Q8TC05 714 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 NEIL2Q969S2 332 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 NSUN5Q96P11 429 aaKnown RBP14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CD180Q99467 661 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 DPYSL5Q9BPU6 564 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 ERVK-6Q9BXR3 956 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 PCBD2Q9H0N5 130 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 MRPS30Q9NP92 439 aaKnown RBP14.32□□□□□ -0.12
CCNE1-202ENST00000357943 C1GALT1Q9NS00 363 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 DNAJC11Q9NVH1 559 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 CUEDC1Q9NWM3 386 aaPredicted RBP14.32□□□□□ -0.12
CCNE1-202ENST00000357943 PDP2Q9P2J9 529 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 OPTCQ9UBM4 332 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 PCTPQ9UKL6 214 aa14.32□□□□□ -0.12
CCNE1-202ENST00000357943 A0A0J9YY10 115 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 WDR91A4D1P6 747 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 NRP2O60462 931 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 BPGMP07738 259 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 RPS17P08708 135 aaKnown RBP14.31□□□□□ -0.12
CCNE1-202ENST00000357943 CDK4P11802 303 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 EPORP19235 508 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 IMPDH1P20839 514 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 MAGP20916 626 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 SERPINB4P48594 390 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 CDH13P55290 713 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 ZFP36L1Q07352 338 aaKnown RBP14.31□□□□□ -0.12
CCNE1-202ENST00000357943 CDC16Q13042 620 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 PDK4Q16654 411 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 UNC50Q53HI1 259 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 HES3Q5TGS1 186 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 CDCP2Q5VXM1 449 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 LIPMQ5VYY2 423 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 RBM44Q6ZP01 1051 aaKnown RBP14.31□□□□□ -0.12
CCNE1-202ENST00000357943 RAB44Q7Z6P3 723 aaPredicted RBP14.31□□□□□ -0.12
CCNE1-202ENST00000357943 TEX9Q8N6V9 391 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 CCDC74BQ96LY2 380 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 PAIP2Q9BPZ3 127 aaKnown RBP14.31□□□□□ -0.12
CCNE1-202ENST00000357943 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 C1QTNF3Q9BXJ4 246 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 ZBTB26Q9HCK0 441 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 SLC6A20Q9NP91 592 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 KCNE2Q9Y6J6 123 aa14.31□□□□□ -0.12
CCNE1-202ENST00000357943 SLC9B1P1A6NJY1 282 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 E7EQ34 232 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 H7BY64 318 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 AGRPO00253 132 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PRAMEF4O60810 478 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SUPT7LO94864 414 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 MT-CO3P00414 261 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 TSPAN8P19075 237 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 CMPK1P30085 196 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 GRIA3P42263 894 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SEPHS1P49903 392 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 NAGLUP54802 743 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 DNAJB13P59910 316 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PPP2R2AP63151 447 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 GTF2H2Q13888 395 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 ZIC1Q15915 447 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 CATSPEREQ5SY80 951 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PHF19Q5T6S3 580 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PRAMEF9Q5VWM5 478 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 GTF2H2CQ6P1K8 395 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PRSS42Q7Z5A4 293 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms