RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 RASGRF2O14827 1237 aa15.06■□□□□ 0
IFT20-202ENST00000357896 SPOPO43791 374 aa15.06■□□□□ 0
IFT20-202ENST00000357896 SNRNP200O75643 2136 aaKnown RBP15.06■□□□□ 0
IFT20-202ENST00000357896 STK10O94804 968 aaKnown RBP15.06■□□□□ 0
IFT20-202ENST00000357896 MED26O95402 600 aa15.06■□□□□ 0
IFT20-202ENST00000357896 TSPAN12O95859 305 aa15.06■□□□□ 0
IFT20-202ENST00000357896 ERVK-10P10266 1014 aa15.06■□□□□ 0
IFT20-202ENST00000357896 RBL1P28749 1068 aa15.06■□□□□ 0
IFT20-202ENST00000357896 ATP5OP48047 213 aa15.06■□□□□ 0
IFT20-202ENST00000357896 EMP3P54852 163 aa15.06■□□□□ 0
IFT20-202ENST00000357896 FRMPD2BQ6IN97 320 aa15.06■□□□□ 0
IFT20-202ENST00000357896 DENND5AQ6IQ26 1287 aa15.06■□□□□ 0
IFT20-202ENST00000357896 TTC23LQ6PF05 361 aa15.06■□□□□ 0
IFT20-202ENST00000357896 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
IFT20-202ENST00000357896 SLC22A15Q8IZD6 547 aa15.06■□□□□ 0
IFT20-202ENST00000357896 AGAP11Q8TF27 550 aa15.06■□□□□ 0
IFT20-202ENST00000357896 SDCCAG3Q96C92 435 aa15.06■□□□□ 0
IFT20-202ENST00000357896 IMMP1LQ96LU5 166 aa15.06■□□□□ 0
IFT20-202ENST00000357896 ZNF354BQ96LW1 612 aa15.06■□□□□ 0
IFT20-202ENST00000357896 TGIF2Q9GZN2 237 aa15.06■□□□□ 0
IFT20-202ENST00000357896 MKKSQ9NPJ1 570 aaPredicted RBP15.06■□□□□ 0
IFT20-202ENST00000357896 KLK4Q9Y5K2 254 aa15.06■□□□□ 0
IFT20-202ENST00000357896 FBN3Q75N90 2809 aa15.06■□□□□ 0
IFT20-202ENST00000357896 A0A0J9YVX5 310 aa15.05■□□□□ -0
IFT20-202ENST00000357896 A8MUI8 341 aa15.05■□□□□ -0
IFT20-202ENST00000357896 NPIPA5E9PKD4 350 aa15.05■□□□□ -0
IFT20-202ENST00000357896 PRRG2O14669 202 aa15.05■□□□□ -0
IFT20-202ENST00000357896 PSTPIP1O43586 416 aa15.05■□□□□ -0
IFT20-202ENST00000357896 ASNA1O43681 348 aa15.05■□□□□ -0
IFT20-202ENST00000357896 PSMB4P28070 264 aa15.05■□□□□ -0
IFT20-202ENST00000357896 EEF1DP29692 281 aaKnown RBP15.05■□□□□ -0
IFT20-202ENST00000357896 PCOLCEQ15113 449 aa15.05■□□□□ -0
IFT20-202ENST00000357896 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
IFT20-202ENST00000357896 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
IFT20-202ENST00000357896 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
IFT20-202ENST00000357896 UNC5DQ6UXZ4 953 aa15.05■□□□□ -0
IFT20-202ENST00000357896 DOLPP1Q86YN1 238 aa15.05■□□□□ -0
IFT20-202ENST00000357896 GHDCQ8N2G8 530 aa15.05■□□□□ -0
IFT20-202ENST00000357896 RAB42Q8N4Z0 105 aa15.05■□□□□ -0
IFT20-202ENST00000357896 STYXQ8WUJ0 223 aa15.05■□□□□ -0
IFT20-202ENST00000357896 ASZ1Q8WWH4 475 aa15.05■□□□□ -0
IFT20-202ENST00000357896 CABS1Q96KC9 395 aa15.05■□□□□ -0
IFT20-202ENST00000357896 IL17FQ96PD4 163 aa15.05■□□□□ -0
IFT20-202ENST00000357896 TTC1Q99614 292 aa15.05■□□□□ -0
IFT20-202ENST00000357896 TSSK1BQ9BXA7 367 aa15.05■□□□□ -0
IFT20-202ENST00000357896 IMPACTQ9P2X3 320 aa15.05■□□□□ -0
IFT20-202ENST00000357896 NPIPA1Q9UND3 350 aa15.05■□□□□ -0
IFT20-202ENST00000357896 CPAMD8Q8IZJ3 1885 aa15.05■□□□□ -0
IFT20-202ENST00000357896 hCG_1818297A0A087WSY0 165 aa15.04■□□□□ -0
IFT20-202ENST00000357896 LOC105369274A0A096LPK9 316 aa15.04■□□□□ -0
IFT20-202ENST00000357896 LOC102723532A0A0G2JNH3 316 aa15.04■□□□□ -0
IFT20-202ENST00000357896 ASPDHA6ND91 283 aa15.04■□□□□ -0
IFT20-202ENST00000357896 ANXA5P08758 320 aa15.04■□□□□ -0
IFT20-202ENST00000357896 DRD2P14416 443 aa15.04■□□□□ -0
IFT20-202ENST00000357896 CD46P15529 392 aa15.04■□□□□ -0
IFT20-202ENST00000357896 COMTP21964 271 aa15.04■□□□□ -0
IFT20-202ENST00000357896 SLC26A3P40879 764 aa15.04■□□□□ -0
IFT20-202ENST00000357896 CSE1LP55060 971 aaKnown RBP15.04■□□□□ -0
IFT20-202ENST00000357896 PPP2R2AP63151 447 aa15.04■□□□□ -0
IFT20-202ENST00000357896 HSPA14Q0VDF9 509 aa15.04■□□□□ -0
IFT20-202ENST00000357896 GRB7Q14451 532 aa15.04■□□□□ -0
IFT20-202ENST00000357896 NAA25Q14CX7 972 aa15.04■□□□□ -0
IFT20-202ENST00000357896 ACER2Q5QJU3 275 aa15.04■□□□□ -0
IFT20-202ENST00000357896 TMEM205Q6UW68 189 aa15.04■□□□□ -0
IFT20-202ENST00000357896 TGIF2LYQ8IUE0 185 aa15.04■□□□□ -0
IFT20-202ENST00000357896 RCOR2Q8IZ40 523 aa15.04■□□□□ -0
IFT20-202ENST00000357896 OR4N4Q8N0Y3 316 aa15.04■□□□□ -0
IFT20-202ENST00000357896 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
IFT20-202ENST00000357896 TMEM178AQ8NBL3 297 aa15.04■□□□□ -0
IFT20-202ENST00000357896 FAM98AQ8NCA5 519 aaKnown RBP15.04■□□□□ -0
IFT20-202ENST00000357896 CFAP61Q8NHU2 1237 aa15.04■□□□□ -0
IFT20-202ENST00000357896 METTL21AQ8WXB1 218 aa15.04■□□□□ -0
IFT20-202ENST00000357896 C10orf90Q96M02 699 aa15.04■□□□□ -0
IFT20-202ENST00000357896 DMRTA2Q96SC8 542 aa15.04■□□□□ -0
IFT20-202ENST00000357896 FOXC2Q99958 501 aa15.04■□□□□ -0
IFT20-202ENST00000357896 UTP23Q9BRU9 249 aaKnown RBP15.04■□□□□ -0
IFT20-202ENST00000357896 TSPAN10Q9H1Z9 355 aaPredicted RBP15.04■□□□□ -0
IFT20-202ENST00000357896 CIDEBQ9UHD4 219 aa15.04■□□□□ -0
IFT20-202ENST00000357896 MKL2Q9ULH7 1088 aa15.04■□□□□ -0
IFT20-202ENST00000357896 PPT2Q9UMR5 302 aa15.04■□□□□ -0
IFT20-202ENST00000357896 HYOU1Q9Y4L1 999 aa15.04■□□□□ -0
IFT20-202ENST00000357896 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
IFT20-202ENST00000357896 AKR1B10O60218 316 aa15.03■□□□□ -0
IFT20-202ENST00000357896 APOC2P02655 101 aa15.03■□□□□ -0
IFT20-202ENST00000357896 GYPCP04921 128 aa15.03■□□□□ -0
IFT20-202ENST00000357896 C8orf89P0DMQ9 161 aa15.03■□□□□ -0
IFT20-202ENST00000357896 IGFBP2P18065 325 aa15.03■□□□□ -0
IFT20-202ENST00000357896 MSNP26038 577 aaKnown RBP15.03■□□□□ -0
IFT20-202ENST00000357896 DNAJA1P31689 397 aaKnown RBP15.03■□□□□ -0
IFT20-202ENST00000357896 TUBA3CQ13748 450 aa15.03■□□□□ -0
IFT20-202ENST00000357896 SPARCL1Q14515 664 aa15.03■□□□□ -0
IFT20-202ENST00000357896 ASTE1Q2TB18 679 aaPredicted RBP15.03■□□□□ -0
IFT20-202ENST00000357896 CCDC181Q5TID7 509 aa15.03■□□□□ -0
IFT20-202ENST00000357896 CES4AQ5XG92 561 aa15.03■□□□□ -0
IFT20-202ENST00000357896 TUBA3EQ6PEY2 450 aa15.03■□□□□ -0
IFT20-202ENST00000357896 NCCRP1Q6ZVX7 275 aaPredicted RBP15.03■□□□□ -0
IFT20-202ENST00000357896 RNF44Q7L0R7 432 aa15.03■□□□□ -0
IFT20-202ENST00000357896 TMEM200AQ86VY9 491 aa15.03■□□□□ -0
IFT20-202ENST00000357896 CCDC50Q8IVM0 306 aa15.03■□□□□ -0
IFT20-202ENST00000357896 BEST3Q8N1M1 668 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms