RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PDSS1Q5T2R2 415 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 SLC24A5Q71RS6 500 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 TOR1AIP2Q8NFQ8 470 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 THAP6Q8TBB0 222 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CDK15Q96Q40 435 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 CALML5Q9NZT1 146 aa16.88■□□□□ 0.29
COL27A1-201ENST00000356083 A0A0G2JPF8 293 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 ILVBLA1L0T0 632 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 A6NL46 340 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 HNRNPCL3B7ZW38 293 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 SLC16A8O95907 504 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 HNRNPCL4P0DMR1 293 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 MMP14P50281 582 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 FAM174BQ3ZCQ3 159 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 GSTCDQ8NEC7 633 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 AZIN2Q96A70 460 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 FARSBQ9NSD9 589 aaKnown RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 OR6C75A6NL08 312 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 FBP2O00757 339 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 ID2Q02363 134 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CPNE9Q8IYJ1 553 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 PXYLP1Q8TE99 480 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CPT1BQ92523 772 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 NODALQ96S42 347 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 TAS2R7Q9NYW3 318 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 PADI2Q9Y2J8 665 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CPS1P31327 1500 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 A0A0U1RQK1 487 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 FAM149AA5PLN7 773 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 SASH3O75995 380 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 POLR2J2Q9GZM3 115 aaKnown RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 PCBD2Q9H0N5 130 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 GTF2IRD1Q9UHL9 959 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 INSIG1O15503 277 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 IFNA2P01563 188 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 XKP51811 444 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 HACD2Q6Y1H2 254 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 S100PBPQ96BU1 408 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 PLEKHA3Q9HB20 300 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 TREML2Q5T2D2 321 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 GATSQ8NAP1 163 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 TMEM134Q9H6X4 195 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 MYEF2Q9P2K5 600 aaKnown RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CCRL2O00421 344 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 GOT2P00505 430 aaKnown RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 C8orf89P0DMQ9 161 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 PTPRZ1P23471 2315 aaPredicted RBP16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CHMP24386 653 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 FNTBP49356 437 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 ZDHHC21Q8IVQ6 265 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 ELMOD2Q8IZ81 293 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 CNTD1Q8N815 330 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 OR52E4Q8NGH9 312 aa16.87■□□□□ 0.29
COL27A1-201ENST00000356083 SHMT1P34896 483 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ATXN7L3Q14CW9 347 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 SPAG16Q8N0X2 631 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 IL4I1Q96RQ9 567 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF225Q9UK10 706 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 GNG2P59768 71 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 RUNX2Q13950 521 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 MFSD8Q8NHS3 518 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 BEX2Q9BXY8 128 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 BEX1Q9HBH7 125 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 SH2B3Q9UQQ2 575 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 PCDHGA10Q9Y5H3 936 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 POTEHQ6S545 545 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF808Q8N4W9 903 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 OR8K5Q8NH50 307 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 SCLYQ96I15 445 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF701Q9NV72 531 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ABCG2Q9UNQ0 655 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ORC5O43913 435 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 MTX2O75431 263 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 CYP3A5P20815 502 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 GAD2Q05329 585 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ACOT12Q8WYK0 555 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ZNF670Q9BS34 389 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ICKQ9UPZ9 632 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ITGA10O75578 1167 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 GP1BBP13224 206 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 TACR2P21452 398 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 GATAD2BQ8WXI9 593 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ATXN10Q9UBB4 475 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 CLDN25C9JDP6 229 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 IFNGR1P15260 489 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 RIDAP52758 137 aaKnown RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 NR1H2P55055 460 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ADGRE1Q14246 886 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 ZER1Q7Z7L7 766 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 CHRAC1Q9NRG0 131 aa16.86■□□□□ 0.29
COL27A1-201ENST00000356083 RNF17Q9BXT8 1623 aaKnown RBP16.86■□□□□ 0.29
COL27A1-201ENST00000356083 FHP07954 510 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 SLC39A4Q6P5W5 647 aa16.85■□□□□ 0.29
COL27A1-201ENST00000356083 JPH3Q8WXH2 748 aaPredicted RBP16.85■□□□□ 0.29
COL27A1-201ENST00000356083 RIOX1Q9H6W3 641 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms