RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 LYPLA2O95372 231 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ARSBP15848 533 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TPH1P17752 444 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ATP5F1P24539 256 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ICAM3P32942 547 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SLC19A1P41440 591 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 RGS6P49758 472 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF81P51508 661 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CDH8P55286 799 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CREMQ03060 361 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ANGPT1Q15389 498 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 UGCGQ16739 394 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CERCAMQ5T4B2 595 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 KDM4DQ6B0I6 523 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 DET1Q7L5Y6 550 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TSPYL5Q86VY4 417 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 HIPK1Q86Z02 1210 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PGBD5Q8N414 524 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SVOPLQ8N434 492 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF675Q8TD23 568 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 NUDT8Q8WV74 236 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 HTR3CQ8WXA8 447 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SLC47A1Q96FL8 570 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SORCS2Q96PQ0 1159 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SIGLEC11Q96RL6 698 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 WDR11Q9BZH6 1224 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 EML4Q9HC35 981 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 VNN3Q9NY84 501 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TAS2R16Q9NYV7 291 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SPATA2Q9UM82 520 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 BTRCQ9Y297 605 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 A0A0A0MRY4 1105 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TCRBV16S1A1N1A0A5B0 115 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FAM74A7A6NL05 159 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PCDHGA12O60330 932 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 HPGDSO60760 199 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 MRPS14O60783 128 aaKnown RBP10.38□□□□□ -0.75
CAPN3-203ENST00000349748 WDPCPO95876 746 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 PTHP01270 115 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 IFNA7P01567 189 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 HGFP14210 728 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 KCNQ1P51787 676 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FOXA1P55317 472 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FOXM1Q08050 763 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CSHL1Q14406 222 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 WSCD2Q2TBF2 565 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FAM74A3Q4VXF1 159 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 RASSF6Q6ZTQ3 369 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 DNAAF3Q8N9W5 541 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 AP2M1Q96CW1 435 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SPATA13Q96N96 652 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 SERPINB11Q96P15 392 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 KCNA7Q96RP8 456 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CGRRF1Q99675 332 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 REG4Q9BYZ8 158 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 LHX5Q9H2C1 402 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ARNT2Q9HBZ2 717 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 MAGEL2Q9UJ55 1249 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ERVK-19Q9WJR5 959 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 TMX2Q9Y320 296 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 FKBP7Q9Y680 259 aa10.38□□□□□ -0.75
CAPN3-203ENST00000349748 ADGRA2Q96PE1 1338 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 DHX15O43143 795 aaKnown RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 RPS19P39019 145 aaKnown RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CAP2P40123 477 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CSRP3P50461 194 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 NUDT6P53370 316 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 LIMK1P53667 647 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CXCR4P61073 352 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 HERVK_113P63132 956 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 RPL6Q02878 288 aaKnown RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 IKZF1Q13422 519 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 FAM92BQ6ZTR7 304 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 DPH6Q7L8W6 267 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 MS4A15Q8N5U1 240 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 SRFBP1Q8NEF9 429 aaKnown RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 QKIQ96PU8 341 aaKnown RBP eCLIP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CNPPD1Q9BV87 410 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 LRRC3Q9BY71 257 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 ZFP64Q9NPA5 681 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 NMRK2Q9NPI5 230 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 SDHAF3Q9NRP4 125 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CUEDC1Q9NWM3 386 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-203ENST00000349748 ACTR10Q9NZ32 417 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 PLCL2Q9UPR0 1127 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 DNAJC15Q9Y5T4 150 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 MROH6A6NGR9 719 aa10.37□□□□□ -0.75
CAPN3-203ENST00000349748 CBX4O00257 560 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms