RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CLIC1O00299 241 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 FKBP9O95302 570 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 FUT4P22083 530 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 HOXA9P31269 272 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ABHD18Q0P651 414 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 BOP1Q14137 746 aaKnown RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ADNP2Q6IQ32 1131 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 FKBP9P1Q75LS8 142 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 DCAF4L2Q8NA75 395 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 RORBQ92753 470 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ELAC1Q9H777 363 aaKnown RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 RDH14Q9HBH5 336 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 IL1RAPQ9NPH3 570 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 TMPRSS11EQ9UL52 423 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 CLDN25C9JDP6 229 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 WNT9AO14904 365 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 KCNK5O95279 499 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 CCDC159P0C7I6 412 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 LHCGRP22888 699 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 AQP1P29972 269 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 PTSQ03393 145 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 TOP3AQ13472 1001 aaPredicted RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 TMCO2Q7Z6W1 182 aaPredicted RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ZBTB8BQ8NAP8 495 aaPredicted RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 FBLIM1Q8WUP2 373 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ASIC4Q96FT7 647 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 ALPK1Q96QP1 1244 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 PANX1Q96RD7 426 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 MTERF1Q99551 399 aaKnown RBP17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 DAPK2Q9UIK4 370 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 GMPPBQ9Y5P6 360 aa17.57■□□□□ 0.4
PTP4A3-202ENST00000349124 NRG2O14511 850 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 NADKO95544 446 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 AOAHP28039 575 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 HPCAL1P37235 193 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 HALP42357 657 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 MAGEA2P43356 314 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 SLC35A2P78381 396 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 SMU1Q2TAY7 513 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 NOXRED1Q6NXP6 359 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 CRIPAKQ8N1N5 446 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF540Q8NDQ6 660 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 RMND5AQ9H871 391 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 KCTD5Q9NXV2 234 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF451Q9Y4E5 1061 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 FPGTO14772 594 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 COL6A1P12109 1028 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 AMD1P17707 334 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 CDH3P22223 829 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 ACVR2AP27037 513 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 LMAN2Q12907 356 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 FOXD4Q12950 439 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 TTLL9Q3SXZ7 439 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF648Q5T619 568 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 PDE12Q6L8Q7 609 aaKnown RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 TTC29Q8NA56 475 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 HJURPQ8NCD3 748 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 OVCA2Q8WZ82 227 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 COPS8Q99627 209 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 SLC29A3Q9BZD2 475 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 AMBNQ9NP70 447 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 LCKP06239 509 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 NSG1P42857 185 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 KIR3DL1P43629 444 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 WNT3P56703 355 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 OCA2Q04671 838 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 DNASE1L3Q13609 305 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 UGT8Q16880 541 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 KDM4DQ6B0I6 523 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 RETSATQ6NUM9 610 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 PTOV1Q86YD1 416 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 MAL2Q969L2 176 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 TPD52L3Q96J77 140 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 CEP295NLQ96MC4 621 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 C2orf49Q9BVC5 232 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 DUSP21Q9H596 190 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 POLE4Q9NR33 117 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 STOML2Q9UJZ1 356 aa17.56■□□□□ 0.4
PTP4A3-202ENST00000349124 KRBA1A5PL33 1030 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 M0R3G1 203 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CCNDBP1O95273 360 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 UGT2B4P06133 528 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CD22P20273 847 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 KDELR2P33947 212 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 KCNC4Q03721 635 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CLCA4Q14CN2 919 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF783Q6ZMS7 281 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CYP2U1Q7Z449 544 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ZZZ3Q8IYH5 903 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 TAMM41Q96BW9 452 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF641Q96N77 438 aaPredicted RBP17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 AKIP1Q9NQ31 210 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 SNX6Q9UNH7 406 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 SAMHD1Q9Y3Z3 626 aaKnown RBP17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 M0QX08 132 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 SCN2BO60939 215 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms