RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 B2RBV5 119 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 TLR4O00206 839 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PSMD12O00232 456 aaPredicted RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 GSC2O15499 205 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 RGS14O43566 566 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 CSF2P04141 144 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 F3P13726 295 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 XRCC1P18887 633 aaPredicted RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 PRPH2P23942 346 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 PKLRP30613 574 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 CPOXP36551 454 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 RAB28P51157 221 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 BLKP51451 505 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 NEK2P51955 445 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 DIO3P55073 304 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 AP5B1Q2VPB7 878 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 ATP6AP1LQ52LC2 224 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 RFTN2Q52LD8 501 aaPredicted RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 PRAMEF14Q5SWL7 426 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 CATSPEREQ5SY80 951 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PRAMEF13Q5VWM6 474 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 SLC30A9Q6PML9 568 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 LPCAT2Q7L5N7 544 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 WDR5BQ86VZ2 330 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 FAM129CQ86XR2 697 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 LAS2Q8IYD9 372 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 C2orf73Q8N5S3 287 aaPredicted RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 POU5F2Q8N7G0 328 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 OR7G3Q8NG95 312 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 OR4K1Q8NGD4 311 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 OR52E1Q8NGJ3 308 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 FBXO27Q8NI29 283 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 ZFPM2Q8WW38 1151 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 SLC5A11Q8WWX8 675 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 UTP4Q969X6 686 aaKnown RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 SPACA7Q96KW9 195 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PPP3R2Q96LZ3 170 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 HBEGFQ99075 208 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 HAUS8Q9BT25 410 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 TBC1D10AQ9BXI6 508 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 ACPTQ9BZG2 426 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PCBD2Q9H0N5 130 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 TM9SF3Q9HD45 589 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 SLC52A3Q9NQ40 469 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 SDR39U1Q9NRG7 319 aaPredicted RBP10.6□□□□□ -0.71
ECM1-201ENST00000346569 AIG1Q9NVV5 245 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 TSC22D4Q9Y3Q8 395 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PCDHGA11Q9Y5H2 935 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 PLXND1Q9Y4D7 1925 aa10.6□□□□□ -0.71
ECM1-201ENST00000346569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 CFAP73A6NFT4 308 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 MAP3K13O43283 966 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 IDO1P14902 403 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 NQO1P15559 274 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 CPA2P48052 419 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 MNAT1P51948 309 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 KCNJ2P63252 427 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 YBX1P67809 324 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 HMGCS1Q01581 520 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PRDX1Q06830 199 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 ILF3Q12906 894 aaKnown RBP eCLIP10.59□□□□□ -0.71
ECM1-201ENST00000346569 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 KRT33BQ14525 404 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 NR6A1Q15406 480 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 AGKQ53H12 422 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 ZNF542PQ5EBM4 170 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 SGO1Q5FBB7 561 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 TSSK4Q6SA08 328 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PARGQ86W56 976 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 MYLK4Q86YV6 388 aaPredicted RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 TMEFF1Q8IYR6 380 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PHACTR4Q8IZ21 702 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 MAML2Q8IZL2 1156 aaPredicted RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 RBM15BQ8NDT2 890 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 ABHD11Q8NFV4 315 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 OR2A1Q8NGT9 310 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 HSPA12BQ96MM6 686 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 EFCAB11Q9BUY7 163 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 RAB11FIP5Q9BXF6 653 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 CADM1Q9BY67 442 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 GSDMCQ9BYG8 508 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 ELOVL6Q9H5J4 265 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 XKR8Q9H6D3 395 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PRMT8Q9NR22 394 aaPredicted RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 TMEM45AQ9NWC5 275 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 SPATA6Q9NWH7 488 aaPredicted RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 GEMIN8Q9NWZ8 242 aaKnown RBP10.59□□□□□ -0.71
ECM1-201ENST00000346569 ASIC5Q9NY37 505 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 TAAR2Q9P1P5 351 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 ICKQ9UPZ9 632 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 KNL1Q8NG31 2342 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 PCM1Q15154 2024 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 TECTAO75443 2155 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 ZNF318Q5VUA4 2279 aa10.59□□□□□ -0.71
ECM1-201ENST00000346569 TRBV23OR9-2A0A075B6M9 112 aa10.58□□□□□ -0.72
ECM1-201ENST00000346569 OR5K4A6NMS3 321 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms