RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 RMND5AQ9H871 391 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 CXorf21Q9HAI6 301 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 FAM118AQ9NWS6 357 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 VNN3Q9NY84 501 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 ITM2BQ9Y287 266 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 U3KQV3 271 aa14.98□□□□□ -0.01
UPF3B-202ENST00000345865 UNC80Q8N2C7 3258 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 TSPAN11A1L157 253 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PABPN1LA6NDY0 278 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 CFAP99D6REC4 459 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 WNT9AO14904 365 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 KPNA5O15131 536 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 EFCAB14O75071 495 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PSIP1O75475 530 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 ETHE1O95571 254 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 HPRP00739 348 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PTPN2P17706 415 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 DCTP40126 519 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 METAP1P53582 386 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 DOC2AQ14183 400 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 GRIN2CQ14957 1233 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 XKR6Q5GH73 641 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 MRPL43Q8N983 215 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PJA1Q8NG27 643 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 BTN2A2Q8WVV5 523 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 REXO5Q96IC2 774 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 LRRC3BQ96PB8 259 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 NAA50Q9GZZ1 169 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 GULP1Q9UBP9 304 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 BTBD3Q9Y2F9 522 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PCDHGA8Q9Y5G5 932 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 IRAK3Q9Y616 596 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 GNGT2O14610 69 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 AP2A2O94973 939 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 IL7RP16871 459 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 PDHA2P29803 388 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 KIR3DL1P43629 444 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 BDKRB1P46663 353 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 ABHD18Q0P651 414 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 MESP2Q0VG99 397 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 NAE1Q13564 534 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 DDX39BQ13838 428 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 DMC1Q14565 340 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 NEDD8Q15843 81 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 ANKRD26P1Q6NSI1 321 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 GALNT10Q86SR1 603 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 RBM23Q86U06 439 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 RAVER1Q8IY67 606 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 C11orf24Q96F05 449 aaPredicted RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 YTHDF1Q9BYJ9 559 aaKnown RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 STOX2Q9P2F5 926 aaPredicted RBP14.97□□□□□ -0.01
UPF3B-202ENST00000345865 AP3M1Q9Y2T2 418 aa14.97□□□□□ -0.01
UPF3B-202ENST00000345865 NPC1O15118 1278 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 SH3BGRLO75368 114 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 ATE1O95260 518 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 FTH1P02794 183 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 EFNA1P20827 205 aaPredicted RBP14.96□□□□□ -0.01
UPF3B-202ENST00000345865 MAPK1P28482 360 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 VAC14Q08AM6 782 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 KCNAB2Q13303 367 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 C16orf72Q14CZ0 275 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 LIPJQ5W064 366 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 AGTRAPQ6RW13 159 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 SPRED2Q7Z698 418 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 THAP5Q7Z6K1 395 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 GAB3Q8WWW8 586 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 PYURFQ96I23 114 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 BARD1Q99728 777 aaKnown RBP14.96□□□□□ -0.01
UPF3B-202ENST00000345865 FAM83CQ9BQN1 747 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 ZSCAN5AQ9BUG6 496 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 MAGIXQ9H6Y5 334 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 SPATA6Q9NWH7 488 aaPredicted RBP14.96□□□□□ -0.01
UPF3B-202ENST00000345865 USE1Q9NZ43 259 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 CXXC1Q9P0U4 656 aaPredicted RBP14.96□□□□□ -0.01
UPF3B-202ENST00000345865 VPS29Q9UBQ0 182 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 IL36AQ9UHA7 158 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 LRRK1Q38SD2 2015 aa14.96□□□□□ -0.01
UPF3B-202ENST00000345865 SLC16A8O95907 504 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 ACPPP15309 386 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SPIDRQ14159 915 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF805Q5CZA5 627 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 GPR107Q5VW38 600 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 LAIR2Q6ISS4 152 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 LIPIQ6XZB0 460 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 TMEM26Q6ZUK4 368 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SYT12Q8IV01 421 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 HOMEZQ8IX15 550 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 CLECL1Q8IZS7 167 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 ZCCHC7Q8N3Z6 543 aaKnown RBP14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SVOPLQ8N434 492 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 CSGALNACT1Q8TDX6 532 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 ING5Q8WYH8 240 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 GLYATL1Q969I3 302 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 MED8Q96G25 268 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 TIMMDC1Q9NPL8 285 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 TMEFF2Q9UIK5 374 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SLC5A10A0PJK1 596 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 IL1RNP18510 177 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 PRPS1L1P21108 318 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 DDX6P26196 483 aaKnown RBP eCLIP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms