RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GLYATL1P3A0A0U1RQE8 302 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CAPN8A6NHC0 703 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SDR42E2A6NKP2 422 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LGALS8O00214 317 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HDAC3O15379 428 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CILPO75339 1184 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LGI1O95970 557 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GAAP10253 952 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DSG3P32926 999 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 VSX2P58304 361 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PTGDRQ13258 359 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNHIT3Q15649 155 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC71Q8N4P6 559 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DNAJC22Q8N4W6 341 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF276Q8N554 614 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DTX3Q8N9I9 347 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 POLEQ07864 2286 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NID2Q14112 1375 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0G2JN53 185 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 M0R143 59 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TAF5LO75529 589 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MMP7P09237 267 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 IGFBP5P24593 272 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GNRHRP30968 328 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 IGFALSP35858 605 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF135P52742 658 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CCNIQ14094 377 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPA1Q15181 289 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C10orf82Q8WW14 230 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DCPSQ96C86 337 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MTG2Q9H4K7 406 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PLCE1Q9P212 2302 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NT5C1B-RDH14C9J2C7 533 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 IFNA21P01568 189 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LCKP06239 509 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GALP22466 123 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-9P63128 1117 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TTLL9Q3SXZ7 439 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR56B2PQ8NGI1 322 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MFSD8Q8NHS3 518 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MAPK15Q8TD08 544 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ACCSQ96QU6 501 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SPG21Q9NZD8 308 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SEC14L3Q9UDX4 400 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SRRDQ9UH36 339 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-19Q9WJR5 959 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FAM50BQ9Y247 325 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CBX6O95503 412 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 H2AFB1P0C5Y9 115 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 H2AFB2P0C5Z0 115 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 UBBP0CG47 229 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 UBCP0CG48 685 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ENTPD1P49961 510 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF143P52747 638 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RPS27AP62979 156 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 UBA52P62987 128 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GK2Q14410 553 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 EIPR1Q53HC9 387 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SLC27A4Q6P1M0 643 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 VASH1Q7L8A9 365 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FBXO25Q8TCJ0 367 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NR4A3Q92570 626 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM70Q9BUB7 260 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CRISPLD1Q9H336 500 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SOX17Q9H6I2 414 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DIMT1Q9UNQ2 313 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TARM1B6A8C7 271 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PHOX2AO14813 284 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 BCKDKO14874 412 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 EGFP01133 1207 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LBPP18428 481 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PTPN7P35236 360 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RGS4P49798 205 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ACBD7Q8N6N7 88 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CPT1BQ92523 772 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CMTM3Q96MX0 182 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF471Q9BX82 626 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 AHSPQ9NZD4 102 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MPDZO75970 2070 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RFXAPO00287 272 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 UBDO15205 165 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MAP2K4P45985 399 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 IFI35P80217 286 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF211Q13398 564 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MFSD13AQ14CX5 517 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GID4Q8IVV7 300 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 BEND2Q8NDZ0 799 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR52E4Q8NGH9 312 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF384Q8TF68 577 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HDAC10Q969S8 669 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C12orf57Q99622 126 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DPEP2Q9H4A9 486 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NMUR1Q9HB89 426 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LY9Q9HBG7 655 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPIEQ9UNP9 301 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHA2Q9Y5H9 948 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms