RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 PRPH2P23942 346 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 MAP4P27816 1152 aaKnown RBP18.78■□□□□ 0.6
COL9A3-201ENST00000343916 PBLDP30039 288 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-201ENST00000343916 BDKRB1P46663 353 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 EPHA5P54756 1037 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 ESRRGP62508 458 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 NAE1Q13564 534 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 ARHGAP15Q53QZ3 475 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 ANKRD26P1Q6NSI1 321 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 THOC6Q86W42 341 aaKnown RBP18.78■□□□□ 0.6
COL9A3-201ENST00000343916 ADAMTS16Q8TE57 1224 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 CLP1Q92989 425 aaKnown RBP18.78■□□□□ 0.6
COL9A3-201ENST00000343916 REXO4Q9GZR2 422 aaKnown RBP18.78■□□□□ 0.6
COL9A3-201ENST00000343916 IL36AQ9UHA7 158 aa18.78■□□□□ 0.6
COL9A3-201ENST00000343916 PER2O15055 1255 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 KPNA5O15131 536 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 FTH1P02794 183 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 GSTM1P09488 218 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 PIGAP37287 484 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 NNMTP40261 264 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 KIR3DL1P43629 444 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 METAP1P53582 386 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 DCDC1P59894 354 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 GSTM4Q03013 218 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 SYTL3Q4VX76 610 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 CES5AQ6NT32 575 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 SYT12Q8IV01 421 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 ERI1Q8IV48 349 aaKnown RBP18.77■□□□□ 0.6
COL9A3-201ENST00000343916 TRAM1L1Q8N609 369 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 LEMD2Q8NC56 503 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 SDCCAG3Q96C92 435 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 ISOC1Q96CN7 298 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 HSPBAP1Q96EW2 488 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 POLR1BQ9H9Y6 1135 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 IFT80Q9P2H3 777 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-201ENST00000343916 ERVK-11Q9UQG0 969 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 TMED5Q9Y3A6 229 aa18.77■□□□□ 0.6
COL9A3-201ENST00000343916 MAPK1P28482 360 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 PDHA2P29803 388 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 VAC14Q08AM6 782 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 NEDD8Q15843 81 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 ZBED5Q49AG3 693 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 CCNYL2Q5T2Q4 361 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 GALNT10Q86SR1 603 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 BTN2A2Q8WVV5 523 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 TMEM159Q96B96 161 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 FBXL8Q96CD0 374 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 OR4K3Q96R72 315 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 ZSCAN5AQ9BUG6 496 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 WRAP53Q9BUR4 548 aaKnown RBP18.77■□□□□ 0.59
COL9A3-201ENST00000343916 OSBPL6Q9BZF3 934 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 PRM3Q9NNZ6 103 aa18.77■□□□□ 0.59
COL9A3-201ENST00000343916 THG1LQ9NWX6 298 aaKnown RBP18.77■□□□□ 0.59
COL9A3-201ENST00000343916 UNC80Q8N2C7 3258 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 SLC16A8O95907 504 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 RETP07949 1114 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 EPCAMP16422 314 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 POLR2IP36954 125 aaKnown RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 STT3AP46977 705 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 HTRA4P83105 476 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 MESP2Q0VG99 397 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 DOC2AQ14183 400 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 DMC1Q14565 340 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 UGT8Q16880 541 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 ZNF284Q2VY69 593 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 KCTD8Q6ZWB6 473 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 GRASPQ7Z6J2 395 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 PANX1Q96RD7 426 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 OSBPL10Q9BXB5 764 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 ING2Q9H160 280 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 COQ6Q9Y2Z9 468 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 PLXNA2O75051 1894 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 TMX2-CTNND1H3BSU7 103 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 PSIP1O75475 530 aaKnown RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 EEF1B2P24534 225 aaKnown RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 PPP2R2BQ00005 443 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 SPIDRQ14159 915 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 RAB39AQ14964 217 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 ACOX1Q15067 660 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 ZNF805Q5CZA5 627 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 TCEAL5Q5H9L2 206 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 AGTRAPQ6RW13 159 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 WDR20Q8TBZ3 569 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 POF1BQ8WVV4 589 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 ITFG2Q969R8 447 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 LRRC3BQ96PB8 259 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 AMBRA1Q9C0C7 1298 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 CXorf21Q9HAI6 301 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 STOX2Q9P2F5 926 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 TBC1D14Q9P2M4 693 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 IRAK3Q9Y616 596 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 GMEB1Q9Y692 573 aa18.76■□□□□ 0.59
COL9A3-201ENST00000343916 MTCL1Q9Y4B5 1905 aaKnown RBP18.76■□□□□ 0.59
COL9A3-201ENST00000343916 E2F6O75461 281 aa18.75■□□□□ 0.59
COL9A3-201ENST00000343916 AP2A2O94973 939 aa18.75■□□□□ 0.59
COL9A3-201ENST00000343916 ETHE1O95571 254 aa18.75■□□□□ 0.59
COL9A3-201ENST00000343916 ELFN1P0C7U0 828 aa18.75■□□□□ 0.59
COL9A3-201ENST00000343916 IL7RP16871 459 aa18.75■□□□□ 0.59
COL9A3-201ENST00000343916 DDX6P26196 483 aaKnown RBP eCLIP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms