RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LUZP4Q9P127 313 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 OR10H1Q9Y4A9 318 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SPATA31E1Q6ZUB1 1445 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLIT1O75093 1534 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 YY2O15391 372 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PER1O15534 1290 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 ITPKAP23677 461 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ERVFC1P60507 584 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MAD2L1BPQ15013 274 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 COQ5Q5HYK3 327 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ETFRF1Q6IPR1 90 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 TBC1D10CQ8IV04 446 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 TBC1D16Q8TBP0 767 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GEMIN6Q8WXD5 167 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 ARPC5LQ9BPX5 153 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PCDHGB5Q9Y5G0 923 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 TOGARAM1Q9Y4F4 1720 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ADGRB1O14514 1584 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NOBOXO60393 691 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SCGB2A1O75556 95 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 UPK1BO75841 260 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 AKAP3O75969 853 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HLA-DPB1P04440 258 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SFTPBP07988 381 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 USP17L8P0C7I0 530 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HDCP19113 662 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MAP2K3P46734 347 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ACSBG2Q5FVE4 666 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SV2AQ7L0J3 742 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PIGWQ7Z7B1 504 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC41A1Q8IVJ1 513 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MCOLN2Q8IZK6 566 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ADGRG2Q8IZP9 1017 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 BRSK1Q8TDC3 778 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ELP5Q8TE02 316 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CHPT1Q8WUD6 406 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 COPS5Q92905 334 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MASTLQ96GX5 879 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NYAP2Q9P242 653 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 BCS1LQ9Y276 419 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 B3GNT3Q9Y2A9 372 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 FFAR3O14843 346 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GPR42O15529 346 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CKBP12277 381 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PBLDP30039 288 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 CCR1P32246 355 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CCR10P46092 362 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 RNF4P78317 190 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 BCL2L15Q5TBC7 163 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 KIAA1614Q5VZ46 1190 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CYP4X1Q8N118 509 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NEIL3Q8TAT5 605 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MAPK15Q8TD08 544 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC44A1Q8WWI5 657 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 COL26A1Q96A83 441 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 RIPOR3Q96MK2 946 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SYT15Q9BQS2 421 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 OSGEPL1Q9H4B0 414 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MINDY3Q9H8M7 445 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PTTG3PQ9NZH4 202 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 LAMP5Q9UJQ1 280 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SPIN1Q9Y657 262 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 SLC1A3P43003 542 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 SMSP52788 366 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 C11orf91Q3C1V1 193 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 XKR6Q5GH73 641 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 METTL11BQ5VVY1 283 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ZNF584Q8IVC4 421 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CADM2Q8N3J6 435 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 EFCAB3Q8N7B9 438 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 UBR7Q8N806 425 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 KCT2Q8NC54 265 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 OR10H5Q8NGA6 315 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PCDHB18PQ96TA0 734 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CRB3Q9BUF7 120 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 BEX2Q9BXY8 128 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 KCNH7Q9NS40 1196 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 COQ3Q9NZJ6 369 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 LGALS13Q9UHV8 139 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 METP08581 1390 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 STK25O00506 426 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CALCAP01258 141 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CTPS1P17812 591 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 HERV-K104P61576 105 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 MLLT1Q03111 559 aaPredicted RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 MARC1Q5VT66 337 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 PNCKQ6P2M8 343 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CNKSR3Q6P9H4 555 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 C3P1Q6ZMU1 363 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 APTXQ7Z2E3 356 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 SNX29P2Q8IUI4 249 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 ZNF619Q8N2I2 560 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 LINC00471Q8N535 108 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 DNAJB8Q8NHS0 232 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
VCAN-203ENST00000343200 LRRC58Q96CX6 371 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 CADM1Q9BY67 442 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms