RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 H3BM21 787 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 GADD45GO95257 159 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PDYNP01213 254 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 ITGA2P17301 1181 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PCBP2Q15366 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 TSTQ16762 297 aaKnown RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PLET1Q6UQ28 207 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 RHBGQ9H310 441 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 FAM83DQ9H4H8 585 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 TRIM45Q9H8W5 580 aaPredicted RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 VPS29Q9UBQ0 182 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 DHRS7Q9Y394 339 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 MTMR11A4FU01 709 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 HOXA2O43364 376 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 CKMT1AP12532 417 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 NOS3P29474 1203 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 SP3Q02447 781 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PLEKHG6Q3KR16 790 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 ERAP2Q6P179 960 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PLEKHM3Q6ZWE6 761 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 ADGRG2Q8IZP9 1017 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 RAB42Q8N4Z0 105 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 KLHDC9Q8NEP7 349 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 TRUB1Q8WWH5 349 aaKnown RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 ACDQ96AP0 544 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 YIPF4Q9BSR8 244 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 AHSPQ9NZD4 102 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 PCDHGA11Q9Y5H2 935 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
SNRNP48-201ENST00000342415 KRBA1A5PL33 1030 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CCNDBP1O95273 360 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 EPOP01588 193 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 C9P02748 559 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 DNTTP04053 509 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 STSP08842 583 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PREPP48147 710 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CSNK2BP67870 215 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PRKCZQ05513 592 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 TMEM53Q6P2H8 277 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CMTM8Q8IZV2 173 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 NT5C3BQ969T7 300 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 OR51B5Q9H339 312 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 RNF6Q9Y252 685 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SCN1AP35498 2009 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 FAM240BA0A1B0GVZ2 78 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 IFNW1P05000 195 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 FGF4P08620 206 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 GPR1P46091 355 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 OR2B6P58173 313 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 Q6ZPB1 254 aaPredicted RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 USP30Q70CQ3 517 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ATL1Q8WXF7 558 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 Q96MT0 163 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SPRTNQ9H040 489 aaPredicted RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 TBC1D17Q9HA65 648 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 NKIRAS2Q9NYR9 191 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PTGFRNQ9P2B2 879 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PCDHGB3Q9Y5G1 929 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 DNMT3AQ9Y6K1 912 aaPredicted RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SHROOM3Q8TF72 1996 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SNTNA6NMZ2 147 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ADAMDEC1O15204 470 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SGTAO43765 313 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 NR2F6P10588 404 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 FPR1P21462 350 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 UGT2B15P54855 530 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PTSQ03393 145 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 QPRTQ15274 297 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CCDC149Q6ZUS6 474 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CNTN4Q8IWV2 1026 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 GHDCQ8N2G8 530 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 MFSD2AQ8NA29 543 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 PPP1R14BQ96C90 147 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 C1orf74Q96LT6 269 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 ERVK13-1Q9NX77 482 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 GSTK1Q9Y2Q3 226 aa12.09□□□□□ -0.47
SNRNP48-201ENST00000342415 CFAP20Q9Y6A4 193 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms