RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 SETMARQ53H47 684 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 UNC50Q53HI1 259 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 PRSS48Q7RTY5 328 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 MAMDC2Q7Z304 686 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 TOP6BLQ8N6T0 577 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 FOXJ1Q92949 421 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 MYLPFQ96A32 169 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 YIPF6Q96EC8 236 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 KLHL15Q96M94 604 aa12.29□□□□□ -0.44
DFFB-202ENST00000339350 SEMA4BQ9NPR2 832 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 MAGED1Q9Y5V3 778 aaPredicted RBP12.29□□□□□ -0.44
DFFB-202ENST00000339350 COL1A2P08123 1366 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 XPNPEP2O43895 674 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 GMDSO60547 372 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 MED26O95402 600 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 RFX2P48378 723 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 DSC2Q02487 901 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 RGS1Q08116 209 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 IHHQ14623 411 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 LTB4RQ15722 352 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 PTCHD3Q3KNS1 767 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 ZNF678Q5SXM1 525 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 MAGEB10Q96LZ2 347 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 TRIM45Q9H8W5 580 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 KLF2Q9Y5W3 355 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 J3KR12 359 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 HGFP14210 728 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 PSMA3P25788 255 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 DNAJB13P59910 316 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 BEND4Q6ZU67 534 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 ISCA2Q86U28 154 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 NLRP8Q86W28 1048 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 HBEGFQ99075 208 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 SPATA9Q9BWV2 254 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 OR51B5Q9H339 312 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 C8orf33Q9H7E9 229 aaPredicted RBP12.28□□□□□ -0.44
DFFB-202ENST00000339350 PCDHB16Q9NRJ7 776 aa12.28□□□□□ -0.44
DFFB-202ENST00000339350 ARPC2O15144 300 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 SOAT2O75908 522 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 HEXBP07686 556 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 TRAPPC2P0DI81 140 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 TRAPPC2BP0DI82 140 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 POU1F1P28069 291 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 CCR1P32246 355 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 ADRA1AP35348 466 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 BRCC3P46736 316 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 CPT1AP50416 773 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 GEMP55040 296 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 HUNKP57058 714 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 GRIK2Q13002 908 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 TNK1Q13470 666 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 PYCR3Q53H96 274 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 CES5AQ6NT32 575 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 TAF2Q6P1X5 1199 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 LRFN4Q6PJG9 635 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 STX12Q86Y82 276 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 TWIST2Q8WVJ9 160 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 MNTQ99583 582 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 SDHCQ99643 169 aaPredicted RBP12.27□□□□□ -0.44
DFFB-202ENST00000339350 BCL7BQ9BQE9 202 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 FAM126AQ9BYI3 521 aaPredicted RBP12.27□□□□□ -0.44
DFFB-202ENST00000339350 SARDHQ9UL12 918 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 NEU3Q9UQ49 428 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 ZNF236Q9UL36 1845 aa12.27□□□□□ -0.44
DFFB-202ENST00000339350 C17orf113A0A1B0GUU1 675 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 GABRDO14764 452 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 CYP7B1O75881 506 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 POP4O95707 220 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 CYBBP04839 570 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 HPGDP15428 266 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 MAOBP27338 520 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 PPP1R8Q12972 351 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 PTPRRQ15256 657 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 GLYATQ6IB77 296 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 FAM45BPQ6NSW5 357 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 RANBP10Q6VN20 620 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 JAZF1Q86VZ6 243 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 FAM45AQ8TCE6 357 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 KLHL6Q8WZ60 621 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 FATE1Q969F0 183 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 RBM18Q96H35 190 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 OR2A14Q96R47 310 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms