RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 IL22Q9GZX6 179 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 C2orf40Q9H1Z8 148 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ALG2Q9H553 416 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 TMEM138Q9NPI0 162 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 AGPAT3Q9NRZ7 376 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PNPOQ9NVS9 261 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF222Q9UK12 451 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 ACSL6Q9UKU0 697 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 OAZ3Q9UMX2 235 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHGA7Q9Y5G6 932 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 CNTNAP5Q8WYK1 1306 aa4.06□□□□□ -1.76
NEDD4-201ENST00000338963 WASHC1A8K0Z3 465 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ADAMDEC1O15204 470 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TGOLN2O43493 480 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GMFGO60234 142 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MPZL2O60487 215 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NPHS1O60500 1241 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TPST1O60507 370 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 F10P00742 488 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CHRNGP07510 517 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 STSP08842 583 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TFE3P19532 575 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MAPK3P27361 379 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CCR10P46092 362 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GP2P55259 537 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PPP3R1P63098 170 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 EMX1Q04741 257 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 YWHAHQ04917 246 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GRB10Q13322 594 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 COL9A3Q14050 684 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ZNF239Q16600 458 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NKAPLQ5M9Q1 402 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CYP2R1Q6VVX0 501 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR4M2Q8NGB6 313 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SPPL3Q8TCT6 385 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GRIN3AQ8TCU5 1115 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CANT1Q8WVQ1 401 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PIH1D2Q8WWB5 315 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FAM122AQ96E09 287 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LINC00052Q96N35 136 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 WFIKKN1Q96NZ8 548 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TRMOQ9BU70 441 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 DUSP21Q9H596 190 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GLOD4Q9HC38 313 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 IQCMA0A1B0GVH7 501 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 METTL21EPA6NDL7 271 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CHURC1-FNTBB4DL54 471 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PTGES3LE9PB15 166 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CLDN4O14493 209 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC16A6O15403 523 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LYRM1O43325 122 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 B4GAT1O43505 415 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LYPLA1O75608 230 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ZMPSTE24O75844 475 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR4E1P0C645 316 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ETS1P14921 441 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 HOXC12P31275 282 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CCR4P51679 360 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 RAG2P55895 527 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 AP3S2P59780 193 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TFAMQ00059 246 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 BEX3Q00994 111 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLAMF1Q13291 335 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ZNHIT3Q15649 155 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 RNASE10Q5GAN6 216 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC46A3Q7Z3Q1 461 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 BTLAQ7Z6A9 289 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OFCC1Q8IZS5 231 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FBXL13Q8NEE6 735 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 BPIFB1Q8TDL5 484 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 R3HDM4Q96D70 268 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LRRC46Q96FV0 321 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ZFP42Q96MM3 310 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FYTTD1Q96QD9 318 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TOR3AQ9H497 397 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CACYBPQ9HB71 228 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 VAT1LQ9HCJ6 419 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC23A1Q9UHI7 598 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PPIEQ9UNP9 301 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PRAMEF33A0A0G2JMD5 474 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 A0A1W2PPQ1 181 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PRAMEF10O60809 474 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 AHSA1O95433 338 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PIGRP01833 764 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TATP17735 454 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CA5AP35218 305 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ACTR1BP42025 376 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PLK1P53350 603 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC26A5P58743 744 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 STARD6P59095 220 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GPR17Q13304 367 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ARHGEF7Q14155 803 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC9A5Q14940 896 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 HFEQ30201 348 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC39A12Q504Y0 691 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LIPNQ5VXI9 398 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ABLIM2Q6H8Q1 611 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC26A9Q7LBE3 791 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GPIHBP1Q8IV16 184 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms