RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 Q0VFX4 171 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 MYBPC3Q14896 1274 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 HIF1AQ16665 826 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 VWA2Q5GFL6 755 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 CCDC137Q6PK04 289 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 PLD3Q8IV08 490 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 HMGCLL1Q8TB92 370 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 DLG3Q92796 817 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 PBKQ96KB5 322 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 SERPINB12Q96P63 405 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 C17orf62Q9BQA9 187 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 ASF1BQ9NVP2 202 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 DOCK10Q96BY6 2186 aa12.77□□□□□ -0.37
NUDCD3-201ENST00000338427 ESPL1Q14674 2120 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 NBPF19A0A087WUL8 3843 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 OR2A25A4D2G3 310 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 VSTM2BA6NLU5 285 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 E5RI56 91 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 AGPSO00116 658 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 PSIP1O75475 530 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 USP1O94782 785 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 MMP11P24347 488 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 ITGA3P26006 1051 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 CCNFP41002 786 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 SARNPP82979 210 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 TIAL1Q01085 375 aaKnown RBP eCLIP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 THOC5Q13769 683 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 HKDC1Q2TB90 917 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 TCTE1Q5JU00 501 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 VWA5B1Q5TIE3 1220 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 NAT8LQ8N9F0 302 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 TTC29Q8NA56 475 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 CLEC1AQ8NC01 280 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 MCUQ8NE86 351 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 ZNF480Q8WV37 535 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 PNPLA2Q96AD5 504 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 PWWP2AQ96N64 755 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 GPR21Q99679 349 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 MACROD1Q9BQ69 325 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 ZNF304Q9HCX3 659 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 IARS2Q9NSE4 1012 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 NTNG1Q9Y2I2 539 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 JRKLQ9Y4A0 524 aa12.76□□□□□ -0.37
NUDCD3-201ENST00000338427 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 E7ENX8 843 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 H3BMM5 538 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 MYO1CO00159 1063 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CD63P08962 238 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 ERGP11308 486 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 GABRB3P28472 473 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CMPK1P30085 196 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 RPA3P35244 121 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 SLC1A2P43004 574 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 GLRBP48167 497 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 ADARP55265 1226 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 TAP2Q03519 686 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 KLC1Q07866 573 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 SYT16Q17RD7 645 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PRTGQ2VWP7 1150 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 MSS51Q4VC12 460 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 HSP90AA5PQ58FG0 334 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CRB2Q5IJ48 1285 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 HP1BP3Q5SSJ5 553 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 FHL5Q5TD97 284 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 FAAH2Q6GMR7 532 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PIWIL4Q7Z3Z4 852 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CUZD1Q86UP6 607 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PAQR7Q86WK9 346 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 IGDCC3Q8IVU1 814 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 RP1L1Q8IWN7 2480 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 LRRC56Q8IYG6 542 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 CPNE9Q8IYJ1 553 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 STT3BQ8TCJ2 826 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 MAGEC3Q8TD91 643 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 OSBPL9Q96SU4 736 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 PLCD4Q9BRC7 762 aa12.75□□□□□ -0.37
NUDCD3-201ENST00000338427 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms