RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 CMTM6Q9NX76 183 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 PACSIN3Q9UKS6 424 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 NCKAP1Q9Y2A7 1128 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 F5P12259 2224 aa13.06□□□□□ -0.32
LMO1-201ENST00000335790 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 TCRBV3S1A0A5B6 114 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 FOXE1O00358 373 aaPredicted RBP13.05□□□□□ -0.32
LMO1-201ENST00000335790 DNAJA2O60884 412 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 FUCA1P04066 466 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 CEACAM5P06731 702 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 C1GALT1C1LP0DN25 315 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 CLNS1AP54105 237 aaKnown RBP13.05□□□□□ -0.32
LMO1-201ENST00000335790 KIAA1024LP59773 190 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 LAPTM5Q13571 262 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 PWP1Q13610 501 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 NFYCQ13952 458 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 CYP2A13Q16696 494 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 TIGD2Q4W5G0 525 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 SGO1Q5FBB7 561 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 LAYNQ6UX15 382 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 HID1Q8IV36 788 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 RIMKLAQ8IXN7 391 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D21Q8IYX1 336 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 PHC3Q8NDX5 983 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 OR5K2Q8NHB8 316 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 NEIL2Q969S2 332 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 TESCQ96BS2 214 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 REPS1Q96D71 796 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 ERLEC1Q96DZ1 483 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 MED8Q96G25 268 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 TMEM74Q96NL1 305 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 APOOQ9BUR5 198 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 PHF7Q9BWX1 381 aaPredicted RBP13.05□□□□□ -0.32
LMO1-201ENST00000335790 DPY30Q9C005 99 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 SLC2A4RGQ9NR83 387 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 C6orf203Q9P0P8 240 aaPredicted RBP13.05□□□□□ -0.32
LMO1-201ENST00000335790 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
LMO1-201ENST00000335790 ZNF839A8K0R7 811 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 C9JVG2 144 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 H3BQ06 376 aaPredicted RBP13.04□□□□□ -0.32
LMO1-201ENST00000335790 PEX1O43933 1283 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 IGLV3-19P01714 112 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SDC1P18827 310 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 CLCNKAP51800 687 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 NEK2P51955 445 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 RHDQ02161 417 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 PTGR1Q14914 329 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 PLA2G4EQ3MJ16 856 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 LCN8Q6JVE9 175 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 DOK6Q6PKX4 331 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SYTL1Q8IYJ3 562 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 KIAA2013Q8IYS2 634 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 BHLHE22Q8NFJ8 381 aaPredicted RBP13.04□□□□□ -0.32
LMO1-201ENST00000335790 OR7G3Q8NG95 312 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 OR8J3Q8NGG0 315 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 GANCQ8TET4 914 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 MTFMTQ96DP5 389 aaKnown RBP13.04□□□□□ -0.32
LMO1-201ENST00000335790 APIPQ96GX9 242 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SLC45A3Q96JT2 553 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 HAUS8Q9BT25 410 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 SLC6A17Q9H1V8 727 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
LMO1-201ENST00000335790 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 VPS29Q9UBQ0 182 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 MAPRE3Q9UPY8 281 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 RUVBL1Q9Y265 456 aaKnown RBP13.04□□□□□ -0.32
LMO1-201ENST00000335790 ASF1AQ9Y294 204 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 DYRK1BQ9Y463 629 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 NEUROG3Q9Y4Z2 214 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
LMO1-201ENST00000335790 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 C5orf42Q9H799 3197 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3DA0A087WVF3 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3IA0A087WXS9 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3EA0A087X179 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3KA0A087X1G2 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3FA6NER0 549 aaPredicted RBP13.03□□□□□ -0.32
LMO1-201ENST00000335790 AQP12BA6NM10 295 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3LB9A6J9 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 NVLO15381 856 aaKnown RBP13.03□□□□□ -0.32
LMO1-201ENST00000335790 TBC1D3HP0C7X1 549 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
LMO1-201ENST00000335790 HTR1EP28566 365 aa13.03□□□□□ -0.32
LMO1-201ENST00000335790 PPP2CBP62714 309 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms