RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PKLRP30613 574 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 COILP38432 576 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 GRIA1P42261 906 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CCR10P46092 362 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SEPHS1P49903 392 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 ILF2Q12905 390 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 DNASE1L3Q13609 305 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 UGT8Q16880 541 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SYTL3Q4VX76 610 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CCDC38Q502W7 563 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 YOD1Q5VVQ6 348 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 PWWP2BQ6NUJ5 590 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 NEK10Q6ZWH5 1172 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 GALNT7Q86SF2 657 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SDCCAG8Q86SQ7 713 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 SYVN1Q86TM6 617 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 TMEM135Q86UB9 458 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 HPS6Q86YV9 775 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 APLFQ8IW19 511 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 DSELQ8IZU8 1212 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 EXD3Q8N9H8 876 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 OR4E2Q8NGC2 313 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 OR6P1Q8NGX9 317 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 GABPB2Q8TAK5 448 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 PROKR1Q8TCW9 393 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 MAGEC3Q8TD91 643 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 APOBEC4Q8WW27 367 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 THAP4Q8WY91 577 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 ITFG2Q969R8 447 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 MAGOHBQ96A72 148 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 NACC2Q96BF6 587 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 PDLIM2Q96JY6 352 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 HRASLS5Q96KN8 279 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 ZNF778Q96MU6 729 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 FAM210AQ96ND0 272 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 TRAPPC9Q96Q05 1148 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 OR2A14Q96R47 310 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CTRCQ99895 268 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SLC25A18Q9H1K4 315 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CHRAC1Q9NRG0 131 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 INTS7Q9NVH2 962 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 ACTR10Q9NZ32 417 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SPATA7Q9P0W8 599 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SLC2A6Q9UGQ3 507 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 PCYOX1Q9UHG3 505 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SERTAD3Q9UJW9 196 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 SRPK3Q9UPE1 567 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 ICKQ9UPZ9 632 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 POLHQ9Y253 713 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 ASF1AQ9Y294 204 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CFAP20Q9Y6A4 193 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 PRSS21Q9Y6M0 314 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 AP1M2Q9Y6Q5 423 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 FRYQ5TBA9 3013 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CCDC78A2IDD5 438 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SDR42E2A6NKP2 422 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 TARM1B6A8C7 271 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 H3BMH7 237 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NDC80O14777 642 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 KIF5CO60282 957 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 NDUFS3O75489 264 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CREG1O75629 220 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ATE1O95260 518 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 MATN4O95460 622 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ONECUT2O95948 504 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 IGHEP01854 428 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 KRT14P02533 472 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CHRM5P08912 532 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 EBLN1P0CF75 366 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZSCAN5DPP0CG00 497 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ERGP11308 486 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PLA2G2AP14555 144 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF28P17035 718 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 POLR2CP19387 275 aaPredicted RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 CD9P21926 228 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PTPN4P29074 926 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 CCR7P32248 378 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RORAP35398 523 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 DLSTP36957 453 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 GABRA4P48169 554 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ARCN1P48444 511 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 RAB28P51157 221 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PMS2P54278 862 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ITGA1P56199 1179 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PPP1CAP62136 330 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SRSF6Q13247 344 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 KCNAB2Q13303 367 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 SEMA3AQ14563 771 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ARHGAP19Q14CB8 494 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF124Q15973 351 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 ZNF789Q5FWF6 425 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 PTRHD1Q6GMV3 140 aaKnown RBP6.1□□□□□ -1.43
SMG1-201ENST00000330588 LRRC8EQ6NSJ5 796 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 RHBDD2Q6NTF9 364 aa6.1□□□□□ -1.43
SMG1-201ENST00000330588 DUS1LQ6P1R4 473 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms