RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 AMIGO1Q86WK6 493 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 RHBGQ9H310 441 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TPT1P8Q9HAU6 139 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 NFKBIL1Q9UBC1 381 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 FAM92AA1XBS5 289 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TCF3P15923 654 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 POLR2EP19388 210 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 CD247P20963 164 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 RCVRNP35243 200 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 MAGEA6P43360 314 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 EPHB3P54753 998 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 SNRPD1P62314 119 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 SRSF11Q05519 484 aaKnown RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 PON2Q15165 354 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 CLEC12AQ5QGZ9 265 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 MTSS1LQ765P7 747 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
EPHB3-201ENST00000330394 MFSD2AQ8NA29 543 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 KCTD13Q8WZ19 329 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 TBX5Q99593 518 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 DERL2Q9GZP9 239 aa13.7□□□□□ -0.22
EPHB3-201ENST00000330394 CHURC1-FNTBB4DL54 471 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 AXIN1O15169 862 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SLITRK5O94991 958 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 PFKMP08237 780 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GPX3P22352 226 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SHMT2P34897 504 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 OR1D2P34982 312 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 TAS2R41P59536 307 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 TUBB3Q13509 450 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ATP13A5Q4VNC0 1218 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 HACD2Q6Y1H2 254 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 LSMEM2Q8N112 164 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SDR39U1Q9NRG7 319 aaPredicted RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 MS4A12Q9NXJ0 267 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 CACNA1CQ13936 2221 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 IQCMA0A1B0GVH7 501 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ALDOCP09972 364 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 PCDH1Q08174 1060 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF613Q6PF04 617 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RNF111Q6ZNA4 994 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 TRPV1Q8NER1 839 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RDH12Q96NR8 316 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GKN1Q9NS71 199 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 IGSF5Q9NSI5 407 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 KCNH4Q9UQ05 1017 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ENTPD4Q9Y227 616 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ASF1AQ9Y294 204 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF701M0R085 212 aaPredicted RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 KIAA0513O60268 411 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 STBD1O95210 358 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 AKR1A1P14550 325 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 CD72P21854 359 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 DNAJB1P25685 340 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 DCTP40126 519 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 KCNQ1P51787 676 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 POLR2LP62875 67 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF45Q02386 682 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ELAVL2Q12926 359 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ABRAXAS2Q15018 415 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 FAM214AQ32MH5 1076 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 C18orf21Q32NC0 220 aaPredicted RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SLC37A3Q8NCC5 494 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RAET1EQ8TD07 263 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ARMC5Q96C12 935 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF599Q96NL3 588 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GINS4Q9BRT9 223 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SEPT4O43236 478 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ACSL4O60488 711 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 KHDRBS3O75525 346 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 ARRB2P32121 409 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
EPHB3-201ENST00000330394 SMARCD3Q6STE5 483 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 RASSF5Q8WWW0 418 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 MGLLQ99685 303 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 GULP1Q9UBP9 304 aa13.69□□□□□ -0.22
EPHB3-201ENST00000330394 HAS3O00219 553 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ASMTP46597 345 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 RPL6Q02878 288 aaKnown RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 CDK5R2Q13319 367 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
EPHB3-201ENST00000330394 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
EPHB3-201ENST00000330394 ZNF730Q6ZMV8 503 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms