RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 OSTM1Q86WC4 334 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ZNF420Q8TAQ5 688 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 THAP3Q8WTV1 239 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CAPSLQ8WWF8 208 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SNX19Q92543 992 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TFAP2CQ92754 450 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 HPDLQ96IR7 371 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 QKIQ96PU8 341 aaKnown RBP eCLIP5.63□□□□□ -1.515e-14■■■■■ 46.8
TRAPPC6B-201ENST00000330149 CSPG4P5Q96PW8 444 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SLC25A23Q9BV35 468 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NOL6Q9H6R4 1146 aaKnown RBP5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 HMG20AQ9NP66 347 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CHRAC1Q9NRG0 131 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 DPP3Q9NY33 737 aa5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TUBA8Q9NY65 449 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 GMPR2Q9P2T1 348 aaKnown RBP5.63□□□□□ -1.51
TRAPPC6B-201ENST00000330149 A0A1B0GVT2 93 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NEMP2A6NFY4 417 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 LRRC14BA6NHZ5 514 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 M0R3G1 203 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 EREGO14944 169 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SLC22A2O15244 555 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NRP2O60462 931 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NDUFS2O75306 463 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 KRT75O95678 551 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CYP11A1P05108 521 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ADH5P11766 374 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 S100A1P23297 94 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 DDX6P26196 483 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SERPINB1P30740 379 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 MAGEA3P43357 314 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PRKAA2P54646 552 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TPTEP56180 551 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 LSM3P62310 102 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SLC12A1Q13621 1099 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CSHL1Q14406 222 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CAPRIN1Q14444 709 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 HERC3Q15034 1050 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 POLD3Q15054 466 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TEAD4Q15561 434 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PPP1R3AQ16821 1122 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NHSL2Q5HYW2 709 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SNAP47Q5SQN1 464 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 HMBOX1Q6NT76 420 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 BRICD5Q6PL45 260 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ZPBP2Q6X784 338 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ZNF574Q6ZN55 896 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 IGFN1Q86VF2 1251 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TMEM25Q86YD3 366 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SNX29P2Q8IUI4 249 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SULF2Q8IWU5 870 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PARP8Q8N3A8 854 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ACVR1CQ8NER5 493 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 FAM110BQ8TC76 370 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CHPT1Q8WUD6 406 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TOE1Q96GM8 510 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NT5C1AQ9BXI3 368 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CRLF2Q9HC73 371 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PTBP2Q9UKA9 531 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ERGIC3Q9Y282 383 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 LRBAP50851 2863 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 A8MU76 341 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 B4GAT1O43505 415 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 MFSD11O43934 449 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SNAP91O60641 907 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 DEAF1O75398 565 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CLPXO76031 633 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ENDOD1O94919 500 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 C8BP07358 591 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 STMN1P16949 149 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CYP3A5P20815 502 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 LMO2P25791 158 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ARL1P40616 181 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 MAGEA6P43360 314 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 GSK3AP49840 483 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 IL2P60568 153 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CXADRP78310 365 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CTBSQ01459 385 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SLC6A3Q01959 620 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 CTBP1Q13363 440 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 RFTN1Q14699 578 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 IMPG1Q17R60 797 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 STEAP4Q687X5 459 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 PMF1Q6P1K2 205 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ADCK1Q86TW2 530 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 EPHX4Q8IUS5 362 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SPATA2LQ8IUW3 424 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 DCP1BQ8IZD4 617 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ZNF619Q8N2I2 560 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 ZCCHC7Q8N3Z6 543 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 RYBPQ8N488 228 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 OR2C3Q8N628 320 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 FAM181AQ8N9Y4 354 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 OR6B3Q8NGW1 331 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 TRUB1Q8WWH5 349 aaKnown RBP5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 SDCCAG3Q96C92 435 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 NXNL1Q96CM4 212 aa5.62□□□□□ -1.51
TRAPPC6B-201ENST00000330149 MRGPRX1Q96LB2 322 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms