RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ITGB6P18564 788 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 S100A5P33763 92 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 MAGEA11P43364 429 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 CAMK2GQ13555 558 aaPredicted RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 DSC3Q14574 896 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 TIGD6Q17RP2 521 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 SLX4IPQ5VYV7 408 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 ZCCHC8Q6NZY4 707 aaKnown RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 VTCN1Q7Z7D3 282 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 P3H2Q8IVL5 708 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 BEND7Q8N7W2 519 aaPredicted RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 ATAD1Q8NBU5 361 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 MTFMTQ96DP5 389 aaKnown RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 HRASLS5Q96KN8 279 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 CLPBQ9H078 707 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 REEP1Q9H902 201 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 THUMPD1Q9NXG2 353 aaKnown RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 GPRC5BQ9NZH0 403 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 PPT2Q9UMR5 302 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 PCDHGA6Q9Y5G7 932 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 NOX1Q9Y5S8 564 aa16.27■□□□□ 0.2
SSH1-201ENST00000326470 ZFP37Q9Y6Q3 630 aaPredicted RBP16.27■□□□□ 0.2
SSH1-201ENST00000326470 KRT6AP02538 564 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 KRT6BP04259 564 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 ZNF7P17097 686 aaPredicted RBP16.27■□□□□ 0.19
SSH1-201ENST00000326470 DGKAP23743 735 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 C21orf33P30042 268 aaPredicted RBP16.27■□□□□ 0.19
SSH1-201ENST00000326470 KDELR2P33947 212 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 KRT6CP48668 564 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 ITGA1P56199 1179 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 MAP2K5Q13163 448 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 VMACQ2NL98 169 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 CCBE1Q6UXH8 406 aaPredicted RBP16.27■□□□□ 0.19
SSH1-201ENST00000326470 SLC46A3Q7Z3Q1 461 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 FAM9CQ8IZT9 166 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 ATL1Q8WXF7 558 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 TSSK3Q96PN8 268 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 NEK6Q9HC98 313 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 CCDC59Q9P031 241 aaKnown RBP16.27■□□□□ 0.19
SSH1-201ENST00000326470 PSORS1C1Q9UIG5 152 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 TMEM98Q9Y2Y6 226 aa16.27■□□□□ 0.19
SSH1-201ENST00000326470 H3BNC9 293 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 TLR5O60602 858 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 RPS3P23396 243 aaKnown RBP eCLIP16.26■□□□□ 0.19
SSH1-201ENST00000326470 TRPC1P48995 793 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 CDH4P55283 916 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 MORN1Q5T089 497 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 GDPD3Q7L5L3 318 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 SYTL1Q8IYJ3 562 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 LKAAEAR1Q8TD35 194 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 C17orf50Q8WW18 174 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 ADAM2Q99965 735 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 RETREG1Q9H6L5 497 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 PLCXD1Q9NUJ7 323 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 CA12O43570 354 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 B4GALT3O60512 393 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 KCNK5O95279 499 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 CLDN9O95484 217 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 RPLP0P05388 317 aaKnown RBP16.26■□□□□ 0.19
SSH1-201ENST00000326470 MAGP20916 626 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 TACR1P25103 407 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 MLIPQ5VWP3 458 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 EIF3MQ7L2H7 374 aaKnown RBP16.26■□□□□ 0.19
SSH1-201ENST00000326470 GALNT10Q86SR1 603 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 CCDC103Q8IW40 242 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 ZZZ3Q8IYH5 903 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 KBTBD8Q8NFY9 601 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 MYDGFQ969H8 173 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 HSH2DQ96JZ2 352 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 HHIPQ96QV1 700 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 MIR1-1HGQ9H1L0 117 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 GREB1Q4ZG55 1949 aa16.26■□□□□ 0.19
SSH1-201ENST00000326470 MICAL3Q7RTP6 2002 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 ACSL4O60488 711 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 SNX4O95219 450 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 MED26O95402 600 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 PDYNP01213 254 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 C9P02748 559 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 ALOX12P18054 663 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 CCL14Q16627 93 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 CPSF6Q16630 551 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSH1-201ENST00000326470 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSH1-201ENST00000326470 ERICH5Q6P6B1 374 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 MSANTD1Q6ZTZ1 278 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 CBLL1Q75N03 491 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 SERPINA9Q86WD7 417 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 HEATR4Q86WZ0 1026 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 EID2BQ96D98 161 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 QPCTLQ9NXS2 382 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 MYADML2A6NDP7 307 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 CLIC1O00299 241 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 DPM1O60762 260 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 STK16O75716 305 aa16.25■□□□□ 0.19
SSH1-201ENST00000326470 SLC25A14O95258 325 aaPredicted RBP16.25■□□□□ 0.19
SSH1-201ENST00000326470 C1QCP02747 245 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms