RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OR4F21O95013 312 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 INMTO95050 263 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SPARCP09486 303 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 BEX3Q00994 111 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 SNAP47Q5SQN1 464 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 TMEM203Q969S6 136 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 GAL3ST4Q96RP7 486 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF717Q9BY31 904 aaPredicted RBP16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ABI3Q9P2A4 366 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 ERVW-1Q9UQF0 538 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
SMCHD1-201ENST00000320876 LRRN3E7EW58 273 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ABCB7O75027 752 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CILPO75339 1184 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 GABBR2O75899 941 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CORO1AP31146 461 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 GNG2P59768 71 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 FGL1Q08830 312 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 KLF1Q13351 362 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ATAT1Q5SQI0 421 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 LDB1Q86U70 411 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC22A15Q8IZD6 547 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SHKBP1Q8TBC3 707 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 DPF3Q92784 378 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 TBX5Q99593 518 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 LRRN3Q9H3W5 708 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PRNPP04156 253 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 H1F0P07305 194 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 NR2C1P13056 603 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 HSD3B1P14060 373 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF572Q7Z3I7 529 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CEP97Q8IW35 865 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 LGI4Q8N135 537 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CCDC120Q96HB5 630 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 TTPALQ9BTX7 342 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CYP3A5P20815 502 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PGDP52209 483 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 HGSNATQ68CP4 663 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 TNFAIP8L2Q6P589 184 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 DRICH1Q6PGQ1 229 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SERPINA9Q86WD7 417 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 COQ8AQ8NI60 647 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 RAB11FIP5Q9BXF6 653 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 MRPS30Q9NP92 439 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF451Q9Y4E5 1061 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SPATA31C2B4DYI2 1134 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 NPPAP01160 153 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PSMA6P60900 246 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ENPP2Q13822 863 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 C2orf73Q8N5S3 287 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF641Q96N77 438 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 GNG8Q9UK08 70 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SSX5O60225 188 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 FOSL1P15407 271 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 VARSP26640 1264 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ARSKQ6UWY0 536 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 C16orf58Q96GQ5 468 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 JSRP1Q96MG2 331 aaPredicted RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 CD93Q9NPY3 652 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC7A8Q9UHI5 535 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PIGBOS1A0A0B4J2F0 54 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 DSG2Q14126 1118 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 TCEAL3Q969E4 200 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 TMBIM1Q969X1 311 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 MFSD3Q96ES6 412 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 KIAA1614Q5VZ46 1190 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PDE12Q6L8Q7 609 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 LPPQ93052 612 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PCDHAC1Q9H158 963 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 ABCG4Q9H172 646 aa16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
SMCHD1-201ENST00000320876 PLD2O14939 933 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 PTGR1Q14914 329 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 CENPSQ8N2Z9 138 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 LCN9Q8WX39 176 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 PLD4Q96BZ4 506 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 XPNPEP2O43895 674 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 PDYNP01213 254 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 GJA1P17302 382 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TMBIM6P55061 237 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 JAGN1Q8N5M9 183 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 IL4I1Q96RQ9 567 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 MMP27Q9H306 513 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 GLUD2P49448 558 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 MINDY4Q4G0A6 757 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 LRRN1Q6UXK5 716 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 AQP11Q8NBQ7 271 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 ACTR3BQ9P1U1 418 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 SEPT4O43236 478 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 CSTBP04080 98 aaKnown RBP16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TUBG1P23258 451 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 PSMD8P48556 350 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 DUSP4Q13115 394 aa16.48■□□□□ 0.23
SMCHD1-201ENST00000320876 TM9SF3Q9HD45 589 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms