RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CLYBLQ8N0X4 340 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ATP6V1E2Q96A05 226 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 NECAB3Q96P71 396 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-201ENST00000317677 FAM83DQ9H4H8 585 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 WDR41Q9HAD4 459 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 FKBP14Q9NWM8 211 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 NUDT4Q9NZJ9 180 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 GIMAP2Q9UG22 337 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 VCANP13611 3396 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ATP6AP2A0A1C7CYW4 349 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 DLGAP1O14490 977 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 AZIN1O14977 448 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ATP6AP2O75787 350 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PRKCAP17252 672 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 STX1BP61266 288 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PRKCQQ04759 706 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 EIF4HQ15056 248 aaKnown RBP12.7□□□□□ -0.38
CPNE1-201ENST00000317677 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ABRAXAS1Q6UWZ7 409 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 LARP4Q71RC2 724 aaKnown RBP eCLIP12.7□□□□□ -0.388e-24■□□□□ 9.5
CPNE1-201ENST00000317677 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PHYKPLQ8IUZ5 450 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 VRK3Q8IV63 474 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PARP8Q8N3A8 854 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 TTC9Q92623 222 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 C12orf10Q9HB07 376 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 FBRSL1Q9HCM7 1045 aaKnown RBP12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PACSIN3Q9UKS6 424 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 PCDHGA3Q9Y5H0 932 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 ST14Q9Y5Y6 855 aa12.7□□□□□ -0.38
CPNE1-201ENST00000317677 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ARNTLO00327 626 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 PIP5K1BO14986 540 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 FFAR2O15552 330 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 DYRK3O43781 588 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 MATN1P21941 496 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 DGKAP23743 735 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 GRIA3P42263 894 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 IST1P53990 364 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 CTAG1AP78358 180 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 MERTKQ12866 999 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 AASDHQ4L235 1098 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 TXNDC11Q6PKC3 985 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ADAMTSL2Q86TH1 951 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 SIX5Q8N196 739 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 TWIST2Q8WVJ9 160 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 SLCO4A1Q96BD0 722 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 NRBF2Q96F24 287 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 COQ10AQ96MF6 247 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 DHRS9Q9BPW9 319 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 WRAP53Q9BUR4 548 aaKnown RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 CD207Q9UJ71 328 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 BTRCQ9Y297 605 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 OARD1Q9Y530 152 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ISPDA4D126 451 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 SOD1P00441 154 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 PRNPP04156 253 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ALDOCP09972 364 aaKnown RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ATP1B2P14415 290 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ITGB7P26010 798 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 AOAHP28039 575 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 LTBRP36941 435 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 DPP6P42658 865 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 RGS4P49798 205 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 PKNOX1P55347 436 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 P2RX3P56373 397 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 IFITM3Q01628 133 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 PCBP2Q15366 365 aaKnown RBP eCLIP12.69□□□□□ -0.386e-8■■□□□ 13
CPNE1-201ENST00000317677 MTX3Q5HYI7 312 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 PERM1Q5SV97 790 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 HMBOX1Q6NT76 420 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 MBOAT1Q6ZNC8 495 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ARMC8Q8IUR7 673 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 TRAM1L1Q8N609 369 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 TMIEQ8NEW7 156 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 OR52B6Q8NGF0 335 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 MAGED4Q96JG8 741 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 CIB1Q99828 191 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 ADI1Q9BV57 179 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 SEMA6AQ9H2E6 1030 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 NEK6Q9HC98 313 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 FBXO8Q9NRD0 319 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 KCTD5Q9NXV2 234 aa12.69□□□□□ -0.38
CPNE1-201ENST00000317677 THAP10Q9P2Z0 257 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 FBXO9Q9UK97 447 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-201ENST00000317677 CKAP5Q14008 2032 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 OR7A17O14581 309 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 SNX2O60749 519 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 GUCA1CO95843 209 aa12.68□□□□□ -0.38
CPNE1-201ENST00000317677 LAMP2P13473 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms