RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CITO14578 2027 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 LOC100506127A0A0U1RQW1 187 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 FBP2O00757 339 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 KLK1P06870 262 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 HLA-FP30511 346 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 PNLIPRP1P54315 467 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ROR2Q01974 943 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 OR7A2PQ8NGA2 310 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 BRINP2Q9C0B6 783 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CMTM6Q9NX76 183 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 M0QX08 132 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 C21orf59P57076 290 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 PPP4R4Q6NUP7 873 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 MINDY1Q8N5J2 469 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TTC29Q8NA56 475 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 URADA6NGE7 173 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 GADD45GO95257 159 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC16A8O95907 504 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 APOA1P02647 267 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF10P21506 573 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ADARP55265 1226 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 IFI44LQ53G44 452 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TRMT2BQ96GJ1 504 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF607Q96SK3 696 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SMURF2Q9HAU4 748 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 KLHL3Q9UH77 587 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF780BQ9Y6R6 833 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 NUP98P52948 1817 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CYP27C1Q4G0S4 372 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 KCTD8Q6ZWB6 473 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TICAM1Q8IUC6 712 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC5A11Q8WWX8 675 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SPATA5L1Q9BVQ7 753 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 RB1P06400 928 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 GPX3P22352 226 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ARMC3Q5W041 872 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF438Q7Z4V0 828 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 KBTBD6Q86V97 674 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CYP4Z2PQ8N1L4 340 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 EGLN2Q96KS0 407 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 EPS8L2Q9H6S3 715 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 IGLV3-10A0A075B6K4 115 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 RTCAO00442 366 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 H6PDO95479 791 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 IFNW1P05000 195 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 BCHEP06276 602 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CCNYL3P0C7X3 344 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 DOC2AQ14183 400 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TLR1Q15399 786 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 MEP1AQ16819 746 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 VMACQ2NL98 169 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 NOXRED1Q6NXP6 359 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 HEATR4Q86WZ0 1026 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SMYD1Q8NB12 490 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC2A11Q9BYW1 496 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SEMA3GQ9NS98 782 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SEC14L3Q9UDX4 400 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 FBXL21Q9UKT6 434 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 OAS3Q9Y6K5 1087 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 GRXCR1A8MXD5 290 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 UGT2B11O75310 529 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 NADKO95544 446 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CMPK1P30085 196 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CENPAP49450 140 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CTSCP53634 463 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TAS2R50P59544 299 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 C1DQ13901 141 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 PTCHD4Q6ZW05 846 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 LIMS2Q7Z4I7 341 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SRFBP1Q8NEF9 429 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF483Q8TF39 744 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC12A9Q9BXP2 914 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF232Q9UNY5 417 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TRMUO75648 421 aaKnown RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CTSKP43235 329 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC6A11P48066 632 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TERB1Q8NA31 727 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TSPEARQ8WU66 669 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 KXD1Q9BQD3 176 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 C6P13671 934 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 LBX1P52954 281 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 GRIK2Q13002 908 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 PCBP2Q15366 365 aaKnown RBP eCLIP6.01□□□□□ -1.451e-6■■■■■ 30.8
PRKDC-201ENST00000314191 OGFRL1Q5TC84 451 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-201ENST00000314191 GATAD2AQ86YP4 633 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 RAB8BQ92930 207 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SRMSQ9H3Y6 488 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CLN6Q9NWW5 311 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 A0A0J9YVX5 310 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TUBB3Q13509 450 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 RUNX3Q13761 415 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 DGUOKQ16854 277 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CNPY1Q3B7I2 92 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 TMIGD1Q6UXZ0 262 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 LIPIQ6XZB0 460 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 SLC22A15Q8IZD6 547 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 DEPDC4Q8N2C3 294 aa6.01□□□□□ -1.45
PRKDC-201ENST00000314191 CBARPQ8N350 705 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms