RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NME6O75414 186 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 GADD45GO95257 159 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CFHP08603 1231 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CLUP10909 449 aa8□□□□□ -1.13
VPS41-202ENST00000310301 GATMP50440 423 aa8□□□□□ -1.13
VPS41-202ENST00000310301 FAM151BQ6UXP7 276 aa8□□□□□ -1.13
VPS41-202ENST00000310301 ANKRD46Q86W74 232 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CRYBG2Q8N1P7 616 aa8□□□□□ -1.13
VPS41-202ENST00000310301 BEND7Q8N7W2 519 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 C11orf65Q8NCR3 313 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SRFBP1Q8NEF9 429 aaKnown RBP8□□□□□ -1.13
VPS41-202ENST00000310301 GRIN3AQ8TCU5 1115 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CCDC107Q8WV48 283 aa8□□□□□ -1.13
VPS41-202ENST00000310301 FBRSQ9HAH7 460 aa8□□□□□ -1.13
VPS41-202ENST00000310301 AMBNQ9NP70 447 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CCDC88AQ3V6T2 1871 aa8□□□□□ -1.13
VPS41-202ENST00000310301 A0A1B0GVM2 712 aa8□□□□□ -1.13
VPS41-202ENST00000310301 TCAF2A6NFQ2 919 aa8□□□□□ -1.13
VPS41-202ENST00000310301 GRXCR1A8MXD5 290 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PSMD9O00233 223 aa8□□□□□ -1.13
VPS41-202ENST00000310301 FBP2O00757 339 aa8□□□□□ -1.13
VPS41-202ENST00000310301 DCLK1O15075 740 aa8□□□□□ -1.13
VPS41-202ENST00000310301 GATBO75879 557 aaKnown RBP8□□□□□ -1.13
VPS41-202ENST00000310301 KRT33AO76009 404 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LDOC1O95751 146 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 GIMD1P0DJR0 217 aa8□□□□□ -1.13
VPS41-202ENST00000310301 GLDCP23378 1020 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CLK3P49761 638 aaKnown RBP8□□□□□ -1.13
VPS41-202ENST00000310301 WNT3AP56704 352 aa8□□□□□ -1.13
VPS41-202ENST00000310301 DMWDQ09019 674 aa8□□□□□ -1.13
VPS41-202ENST00000310301 TCEA2Q15560 299 aa8□□□□□ -1.13
VPS41-202ENST00000310301 C2orf27AQ580R0 203 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SFT2D3Q587I9 215 aa8□□□□□ -1.13
VPS41-202ENST00000310301 FBXO48Q5FWF7 155 aa8□□□□□ -1.13
VPS41-202ENST00000310301 TOR1AIP1Q5JTV8 583 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SLC36A4Q6YBV0 504 aa8□□□□□ -1.13
VPS41-202ENST00000310301 C1orf127Q8N9H9 656 aa8□□□□□ -1.13
VPS41-202ENST00000310301 CXorf40BQ96DE9 158 aa8□□□□□ -1.13
VPS41-202ENST00000310301 UHRF1Q96T88 793 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 PKP2Q99959 881 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LHX5Q9H2C1 402 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SAV1Q9H4B6 383 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 TCF7L1Q9HCS4 588 aa8□□□□□ -1.13
VPS41-202ENST00000310301 H3BNC9 293 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LINGO3P0C6S8 592 aa8□□□□□ -1.13
VPS41-202ENST00000310301 MPP1Q00013 466 aa8□□□□□ -1.13
VPS41-202ENST00000310301 ADAM15Q13444 863 aa8□□□□□ -1.13
VPS41-202ENST00000310301 ZNF423Q2M1K9 1284 aa8□□□□□ -1.13
VPS41-202ENST00000310301 UBAP2Q5T6F2 1119 aaKnown RBP8□□□□□ -1.13
VPS41-202ENST00000310301 ZNF776Q68DI1 518 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 LHX8Q68G74 356 aa8□□□□□ -1.13
VPS41-202ENST00000310301 TMEM17Q86X19 198 aa8□□□□□ -1.13
VPS41-202ENST00000310301 DCBLD1Q8N8Z6 715 aa8□□□□□ -1.13
VPS41-202ENST00000310301 OR5J2Q8NH18 312 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PIGXQ8TBF5 258 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SLC38A4Q969I6 547 aa8□□□□□ -1.13
VPS41-202ENST00000310301 KCNC2Q96PR1 638 aa8□□□□□ -1.13
VPS41-202ENST00000310301 KXD1Q9BQD3 176 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PHF7Q9BWX1 381 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 GATA5Q9BWX5 397 aaPredicted RBP8□□□□□ -1.13
VPS41-202ENST00000310301 CHRAC1Q9NRG0 131 aa8□□□□□ -1.13
VPS41-202ENST00000310301 MTMR10Q9NXD2 777 aa8□□□□□ -1.13
VPS41-202ENST00000310301 SALL4Q9UJQ4 1053 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LRRC42Q9Y546 428 aa8□□□□□ -1.13
VPS41-202ENST00000310301 PCDHB11Q9Y5F2 797 aa8□□□□□ -1.13
VPS41-202ENST00000310301 LOC100509620A0A075B734 347 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 A0A1W2PPW3 197 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CSN2P05814 226 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 HOXB2P14652 356 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PTX3P26022 381 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 LCN1P31025 176 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CSTF2P33240 577 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS41-202ENST00000310301 WASP42768 502 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ARCN1P48444 511 aaKnown RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 PSMD8P48556 350 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 TDGQ13569 410 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 C9orf64Q5T6V5 341 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZDHHC20Q5W0Z9 365 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 HGSNATQ68CP4 663 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SLC30A6Q6NXT4 461 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 AMIGO1Q86WK6 493 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 VN1R2Q8NFZ6 395 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SLC22A17Q8WUG5 538 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF471Q9BX82 626 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 NUDT15Q9NV35 164 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 RIMKLBQ9ULI2 386 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SLC22A2O15244 555 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF217O75362 1048 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 MYCLP1P12525 358 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 XRCC1P18887 633 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 CDK18Q07002 472 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 C2orf80Q0P641 193 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PON2Q15165 354 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 VMACQ2NL98 169 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 LCLAT1Q6UWP7 414 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 UNC5BQ8IZJ1 945 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms