RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 EFCAB11Q9BUY7 163 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 EHD1Q9H4M9 534 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 PRM3Q9NNZ6 103 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 ICKQ9UPZ9 632 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 SH2B3Q9UQQ2 575 aa21.77■■□□□ 1.08
IRF3-201ENST00000309877 OR5K4A6NMS3 321 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 BCAT2O15382 392 aaPredicted RBP21.76■■□□□ 1.07
IRF3-201ENST00000309877 ALDOCP09972 364 aaKnown RBP21.76■■□□□ 1.07
IRF3-201ENST00000309877 SLC2A4P14672 509 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 PIK3R1P27986 724 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 NEK2P51955 445 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 NXPH1P58417 271 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 NAA25Q14CX7 972 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 ELOCQ15369 112 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 HIST2H2ACQ16777 129 aaPredicted RBP21.76■■□□□ 1.07
IRF3-201ENST00000309877 KIF19Q2TAC6 998 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 PAGE2BQ5JRK9 111 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 C6orf136Q5SQH8 315 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 HIST2H2AA3Q6FI13 130 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 C11orf74Q86VG3 221 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 FNDC5Q8NAU1 212 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 LCN9Q8WX39 176 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 LRRC61Q9BV99 259 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 PCDHGA11Q9Y5H2 935 aa21.76■■□□□ 1.07
IRF3-201ENST00000309877 H0YIV9 168 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 VILLO15195 856 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 VIPP01282 170 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 NME1P15531 152 aaKnown RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 CSNK1EP49674 416 aaKnown RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 ATP4BP51164 291 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 AFF3P51826 1226 aaKnown RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 ERVK-8P63133 956 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 LAPTM5Q13571 262 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 RPS6KA2Q15349 733 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 REPS1Q96D71 796 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 WDR34Q96EX3 536 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 LRP4O75096 1905 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 A0A1W2PPV9 198 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 LSM1O15116 133 aaKnown RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 CDH1P12830 882 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 EZRP15311 586 aaKnown RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 PRDX6P30041 224 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 SHMT2P34897 504 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 DHPSP49366 369 aaPredicted RBP21.75■■□□□ 1.07
IRF3-201ENST00000309877 HMGCS1Q01581 520 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 ZNF33BQ06732 778 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 E2F2Q14209 437 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 SLBPQ14493 270 aaKnown RBP eCLIP21.75■■□□□ 1.07
IRF3-201ENST00000309877 GSTA3Q16772 222 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 AP5B1Q2VPB7 878 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 LYSMD4Q5XG99 296 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 MED27Q6P2C8 311 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 FAM46DQ8NEK8 389 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 CCL27Q9Y4X3 112 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 PCDHB11Q9Y5F2 797 aa21.75■■□□□ 1.07
IRF3-201ENST00000309877 KIR2DS5A0A0G2JLQ3 304 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 A0A0G2JNG1 304 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 LOC100653049A0A140TA62 436 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 KIR2DS3K7RE56 304 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 PSMD12O00232 456 aaPredicted RBP21.74■■□□□ 1.07
IRF3-201ENST00000309877 KRT34O76011 436 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 PCNAP12004 261 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 IDO1P14902 403 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 XRCC1P18887 633 aaPredicted RBP21.74■■□□□ 1.07
IRF3-201ENST00000309877 CPA2P48052 419 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 MNAT1P51948 309 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 IRX1P78414 480 aaPredicted RBP21.74■■□□□ 1.07
IRF3-201ENST00000309877 KIR2DS5Q14953 304 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 TEAD4Q15561 434 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 AMIGO1Q86WK6 493 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 POU5F2Q8N7G0 328 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 OR4E2Q8NGC2 313 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 LMX1AQ8TE12 382 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 GAB3Q8WWW8 586 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 JPH3Q8WXH2 748 aaPredicted RBP21.74■■□□□ 1.07
IRF3-201ENST00000309877 KLHL29Q96CT2 875 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 ACPTQ9BZG2 426 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 POT1Q9NUX5 634 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 DOLKQ9UPQ8 538 aa21.74■■□□□ 1.07
IRF3-201ENST00000309877 SERTM1A2A2V5 107 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 THRAP10827 490 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 COX4I1P13073 169 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 PSMB5P28074 263 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 EMX2Q04743 252 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 ACTN3Q08043 901 aaPredicted RBP21.73■■□□□ 1.07
IRF3-201ENST00000309877 SRSF5Q13243 272 aaKnown RBP21.73■■□□□ 1.07
IRF3-201ENST00000309877 DDX39BQ13838 428 aaKnown RBP21.73■■□□□ 1.07
IRF3-201ENST00000309877 PLCL1Q15111 1095 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 GKN2Q86XP6 184 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 MAML2Q8IZL2 1156 aaPredicted RBP21.73■■□□□ 1.07
IRF3-201ENST00000309877 MIER2Q8N344 545 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 TMEM105Q8N8V8 129 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 OR7G3Q8NG95 312 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 WDR20Q8TBZ3 569 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 ZDHHC1Q8WTX9 485 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 ZFPM2Q8WW38 1151 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 C1orf50Q9BV19 199 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 SRMSQ9H3Y6 488 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 PELI2Q9HAT8 420 aa21.73■■□□□ 1.07
IRF3-201ENST00000309877 LRTM1Q9HBL6 345 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms