RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 TGFBR3Q03167 851 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SRSF9Q13242 221 aaKnown RBP eCLIP1.2□□□□□ -2.22
CEP290-201ENST00000309041 TNK1Q13470 666 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CDH18Q13634 790 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MEF2DQ14814 521 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PDK2Q15119 407 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NOMO1Q15155 1222 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NAB2Q15742 525 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CTXN3Q4LDR2 81 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NOMO2Q5JPE7 1267 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RIPPLY2Q5TAB7 128 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NBPF12Q5TAG4 269 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 TMEM164Q5U3C3 297 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FRG2Q64ET8 278 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CWF19L1Q69YN2 538 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 FAM71E1Q6IPT2 247 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TTC23LQ6PF05 361 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LYPD5Q6UWN5 251 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DGLUCYQ7Z3D6 616 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PRICKLE2Q7Z3G6 844 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LHFPL3Q86UP9 236 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 STPG3Q8N7X2 389 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZFPM2Q8WW38 1151 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF606Q8WXB4 792 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 L3MBTL2Q969R5 705 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TMEM125Q96AQ2 219 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ELMO3Q96BJ8 720 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CINPQ9BW66 212 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 IRX2Q9BZI1 471 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ENKD1Q9H0I2 346 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FNDC4Q9H6D8 234 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 TCF7L2Q9NQB0 619 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GJB4Q9NTQ9 266 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC17A6Q9P2U8 582 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 INTS6Q9UL03 887 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CFL2Q9Y281 166 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHB1Q9Y5F3 818 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ARHGAP5Q13017 1502 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CCDC187A0A096LP49 1063 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 A0A0U1RQV1 116 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LRRC72A6NJI9 287 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DFFAO00273 331 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 WWP2O00308 870 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SAP18O00422 153 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 GYG2O15488 501 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ERI3O43414 337 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC37A4O43826 429 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 B4GALT3O60512 393 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KLHL41O60662 606 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CTNSO60931 367 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NDUFS3O75489 264 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GCATO75600 419 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GLUD1P00367 558 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PROS1P07225 676 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IL3P08700 152 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ETFAP13804 333 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IDO1P14902 403 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TBPP20226 339 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GLRA2P23416 452 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ITGB8P26012 769 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GRK3P35626 688 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TNNI2P48788 182 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GLUD2P49448 558 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RGS4P49798 205 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RAB27AP51159 221 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ELF3P78545 371 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 HGFACQ04756 655 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NFATC2Q13469 925 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 INPP5JQ15735 1006 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPAT3Q53EU6 434 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TTC23Q5W5X9 447 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 EFCAB12Q6NXP0 572 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ATF7IPQ6VMQ6 1270 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RANBP10Q6VN20 620 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 Q6ZTK2 550 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SEM1Q6ZVN7 128 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FJX1Q86VR8 437 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PEX5LQ8IYB4 626 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF683Q8IZ20 524 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 STPG4Q8N801 248 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PTGR2Q8N8N7 351 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SNX31Q8N9S9 440 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NFAM1Q8NET5 270 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR2D3Q8NGH3 330 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR52J3Q8NH60 311 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR5AK3PQ8NH89 298 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PNPT1Q8TCS8 783 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF483Q8TF39 744 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 LRR1Q96L50 414 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FCRL2Q96LA5 508 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPR20Q99678 358 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC30A3Q99726 388 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 HDHD3Q9BSH5 251 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 TBC1D10AQ9BXI6 508 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BOLA2Q9H3K6 86 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF160Q9HCG1 818 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DDX18Q9NVP1 670 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ETAA1Q9NY74 926 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SEMA5BQ9P283 1151 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF624Q9P2J8 865 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms