RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 MBOAT4Q96T53 435 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 GORASP2Q9H8Y8 452 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 NEK6Q9HC98 313 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLAMF8Q9P0V8 285 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 DNAJB9Q9UBS3 223 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 BAG5Q9UL15 447 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 PCDHGB1Q9Y5G3 927 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 SNX5Q9Y5X3 404 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 MN1Q10571 1320 aaPredicted RBP10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 SUPT3HB4E1H0 165 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 G3V2T6 193 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 HOXC11O43248 304 aaPredicted RBP10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 NAGAP17050 411 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 PCMT1P22061 227 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 ENPP1P22413 925 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 IL32P24001 234 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 IL12AP29459 219 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 RAD23AP54725 363 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 PHC1P78364 1004 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 PRKG2Q13237 762 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 CTF1Q16619 201 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 LRRC73Q5JTD7 316 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 TXNDC11Q6PKC3 985 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZBTB46Q86UZ6 589 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 DTWD1Q8N5C7 304 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 ASCC1Q8N9N2 400 aaKnown RBP10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 DCAF4L2Q8NA75 395 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 WARS2Q9UGM6 360 aaKnown RBP10.06□□□□□ -0.8
APOBEC3F-201ENST00000308521 A0A1B0GTL3 188 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF821O75541 412 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 EPOP01588 193 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 IL7RP16871 459 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 MTHFRP42898 656 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 PPP2R2BQ00005 443 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 MESP2Q0VG99 397 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 IL18R1Q13478 541 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 INO80DQ53TQ3 878 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 SULT1C3Q6IMI6 304 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RETSATQ6NUM9 610 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 UGT3A1Q6NUS8 523 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 SYVN1Q86TM6 617 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ARMC8Q8IUR7 673 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 CCDC28AQ8IWP9 274 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF366Q8N895 744 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR52E4Q8NGH9 312 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 PROKR1Q8TCW9 393 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 CYB5D2Q8WUJ1 264 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF566Q969W8 418 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 TP53INP1Q96A56 240 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RBM4BQ9BQ04 359 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RBM4Q9BWF3 364 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 SEMA4BQ9NPR2 832 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 SPHK2Q9NRA0 654 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 FBXO8Q9NRD0 319 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 HEBP1Q9NRV9 189 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RNF112Q9ULX5 631 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF99A8MXY4 864 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 LINC01565O15544 149 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 NDUFS2O75306 463 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ECI2O75521 394 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RPP40O75818 363 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 GABARAPO95166 117 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 CES1P23141 567 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 RYKP34925 604 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 TPD52P55327 224 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ECT2LQ008S8 904 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ACOX1Q15067 660 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF77Q15935 545 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 MEP1AQ16819 746 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 DPY19L1Q2PZI1 675 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 TYSND1Q2T9J0 566 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 LRIT3Q3SXY7 679 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 C6orf136Q5SQH8 315 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF783Q6ZMS7 281 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR8J3Q8NGG0 315 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 FBLIM1Q8WUP2 373 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 SGCDQ92629 289 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 CDKN2AIPNLQ96HQ2 116 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 NODALQ96S42 347 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 NECTIN3Q9NQS3 549 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 WBP11Q9Y2W2 641 aaKnown RBP10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 V9GYQ6 96 aa10.05□□□□□ -0.8
APOBEC3F-201ENST00000308521 VCANP13611 3396 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 TEX51A0A1B0GUA7 166 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZSCAN5BA6NJL1 495 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 HNRNPA1P09651 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 SRCP12931 536 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 CASP2P42575 452 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 CD47Q08722 323 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 PWP1Q13610 501 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 NPTX1Q15818 432 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 CTU2Q2VPK5 515 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 LAIR2Q6ISS4 152 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ERAP2Q6P179 960 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms