RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 UROC1Q96N76 676 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SMIM14Q96QK8 99 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 DUSP26Q9BV47 211 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 NLNQ9BYT8 704 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SERHL2Q9H4I8 314 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SERHLQ9NQF3 203 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM221A6NGB7 291 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 TRIM64CA6NLI5 447 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RPS17P08708 135 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ANXA8P13928 327 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 KDELR2P33947 212 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 UGT2B15P54855 530 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 IQCCQ4KMZ1 466 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 BEND5Q7L4P6 421 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 RHOXF1Q8NHV9 184 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 EFHD2Q96C19 240 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ANKHQ9HCJ1 492 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 LYVE1Q9Y5Y7 322 aa13.12□□□□□ -0.31
SEC23A-201ENST00000307712 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TCF3P15923 654 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PFKLP17858 780 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 OR1E2P47887 323 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 MTA1Q13330 715 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 CYP27C1Q4G0S4 372 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TUBA3EQ6PEY2 450 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 MBOAT1Q6ZNC8 495 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 BTLAQ7Z6A9 289 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TCAIMQ8N3R3 496 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 OR8H1Q8NGG4 311 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 DNAJB8Q8NHS0 232 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 DUS3LQ96G46 650 aaKnown RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 KLHL1Q9NR64 748 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 COMMD3Q9UBI1 195 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SPO11Q9Y5K1 396 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 LAMB2P55268 1798 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF24P17028 368 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PRPS1L1P21108 318 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PRKAG1P54619 331 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 OXA1LQ15070 435 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PIANPQ8IYJ0 282 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 KCNN1Q92952 543 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SHANK3Q9BYB0 1731 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 BTN3A3O00478 584 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 NUAK1O60285 661 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 GADD45GO95257 159 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 YES1P07947 543 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 BNC1Q01954 994 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 IL18Q14116 193 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 ADPRMQ3LIE5 342 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 HJURPQ8NCD3 748 aaPredicted RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PPCDCQ96CD2 204 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF583Q96ND8 569 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 EVPLQ92817 2033 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 A6NL46 340 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SOCS7O14512 581 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 DDX5P17844 614 aaKnown RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TRMT11Q7Z4G4 463 aaKnown RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 LRRTM3Q86VH5 581 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 TRIT1Q9H3H1 467 aaKnown RBP13.11□□□□□ -0.31
SEC23A-201ENST00000307712 ZDHHC6Q9H6R6 413 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 PRDM8Q9NQV8 689 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 GKN1Q9NS71 199 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 SLC22A14Q9Y267 594 aa13.11□□□□□ -0.31
SEC23A-201ENST00000307712 A0A096LPI6 279 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 HAS3O00219 553 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 KIAA0513O60268 411 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 CCNB2O95067 398 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 C21orf33P30042 268 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 PPP2R1BP30154 601 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 RORCP51449 518 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms