RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CKLFQ9UBR5 152 aa10.43□□□□□ -0.74
SYNPO2-201ENST00000307142 BTN3A3O00478 584 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 OR5F1O95221 314 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 KRR1Q13601 381 aaKnown RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 DGCR6Q14129 220 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MARCH8Q5T0T0 291 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ANKRD54Q6NXT1 300 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 DRICH1Q6PGQ1 229 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF781Q8N8C0 355 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 OR10Q1Q8NGQ4 319 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 TSEN15Q8WW01 171 aaKnown RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 RETREG1Q9H6L5 497 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ARHGEF3Q9NR81 526 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PRTFDC1Q9NRG1 225 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 STMN3Q9NZ72 180 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 HEMK1Q9Y5R4 338 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 DUXAA6NLW8 204 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 H7BY64 318 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 TNFRSF10BO14763 440 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FABP3P05413 133 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 CD6P30203 668 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MSX2P35548 267 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PTPN5P54829 565 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SNAPC1Q16533 368 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PLEKHS1Q5SXH7 462 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 REP15Q6BDI9 236 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 OR4C6Q8NH72 309 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 OR5AK3PQ8NH89 298 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PRAP1Q96NZ9 151 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 B3GAT2Q9NPZ5 323 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MRPL39Q9NYK5 338 aaKnown RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 C3orf18Q9UK00 162 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF860A6NHJ4 632 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PRAMEF26H0Y7S4 382 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 IFNW1P05000 195 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SERPINB1P30740 379 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 TDGQ13569 410 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 COL9A2Q14055 689 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FRG2Q64ET8 278 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 RTL10Q7L3V2 364 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FRG2BQ96QU4 278 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 DYTNA2CJ06 578 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FOXO6A8MYZ6 492 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 LATO43561 262 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SEC24AO95486 1093 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MYL9P24844 172 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC9A4Q6AI14 798 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 AGTRAPQ6RW13 159 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ZNF540Q8NDQ6 660 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 HSPA12BQ96MM6 686 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 CLPTM1O96005 669 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FGL2Q14314 439 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 RFX4Q33E94 735 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 FAM78AQ5JUQ0 283 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 GLYATQ6IB77 296 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 AMIGO1Q86WK6 493 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PHOSPHO1Q8TCT1 267 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 KBTBD7Q8WVZ9 684 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 RLN3Q8WXF3 142 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 MYDGFQ969H8 173 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 EFHD2Q96C19 240 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC35A5Q9BS91 424 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 LINC01553A4QN01 128 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 NPHS1O60500 1241 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ECDO95905 644 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ITGA1P56199 1179 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC34A1Q06495 639 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 ADRM1Q16186 407 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 IQCHQ86VS3 1027 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 RTKNQ9BST9 563 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 Q9N2J8 555 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 PAIP2BQ9ULR5 123 aaKnown RBP10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 SDK1Q7Z5N4 2213 aa10.42□□□□□ -0.74
SYNPO2-201ENST00000307142 GLOD5A6NK44 160 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 SYNGR4O95473 234 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 GDF5P43026 501 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PTGIRP43119 386 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 PCYT1AP49585 367 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MEF2AQ02078 507 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 RHAGQ02094 409 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 SLC25A24Q6NUK1 477 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 LNX2Q8N448 690 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 NAT14Q8WUY8 206 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 COQ7Q99807 217 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MVB12BQ9H7P6 319 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 ZCCHC3Q9NUD5 404 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 DNMT3BQ9UBC3 853 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 MYO5AQ9Y4I1 1855 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 LAMB1P07942 1786 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 A6NL46 340 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 TNFRSF11BO00300 401 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 ITGADQ13349 1161 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 NET1Q7Z628 596 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-201ENST00000307142 CILP2Q8IUL8 1156 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms