RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CLRN1P58418 232 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF846Q147U1 533 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 C6orf132Q5T0Z8 1188 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ARMC3Q5W041 872 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM225Q6GV28 225 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 C22orf39Q6P5X5 142 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TCAIMQ8N3R3 496 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 WDR60Q8WVS4 1066 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SMOQ99835 787 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC35A5Q9BS91 424 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TBC1D10AQ9BXI6 508 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 MYEF2Q9P2K5 600 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CORO1CQ9ULV4 474 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CDC14AQ9UNH5 594 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 H0YGN5 161 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PLIN3O60664 434 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RB1P06400 928 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PRSS56P0CW18 603 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 FBLP22087 321 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC26A3P40879 764 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CCT3P49368 545 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 AGTR2P50052 363 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RUNX3Q13761 415 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ERV3-1Q14264 604 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 LMNTD1Q8N9Z9 388 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PTCD3Q96EY7 689 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 HIC2Q96JB3 615 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SNTG1Q9NSN8 517 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 UPB1Q9UBR1 384 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 HEMK1Q9Y5R4 338 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 A0A1W2PPK0 400 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TLX3O43711 291 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PRKCIP41743 596 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ELOCQ15369 112 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CDKN3Q16667 212 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RTP2Q5QGT7 225 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 FBXO42Q6P3S6 717 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 KCNK13Q9HB14 408 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 DYTNA2CJ06 578 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ITGB1P05556 798 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ANXA2P07355 339 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF865P0CJ78 1059 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 MATN1P21941 496 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 UQCRC1P31930 480 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SMIM11AP58511 58 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FOLH1Q04609 750 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TRMT5Q32P41 509 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RALGPS1Q5JS13 557 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 AHSA2Q719I0 299 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 LINGO2Q7L985 606 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SRFBP1Q8NEF9 429 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OR7A2PQ8NGA2 310 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PIGXQ8TBF5 258 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RAB8BQ92930 207 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SFXN1Q9H9B4 322 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 KIF20BQ96Q89 1820 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SNX4O95219 450 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SOX14O95416 240 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C8GP07360 202 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 EDNRAP25101 427 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RPS14P62263 151 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 BNIP3Q12983 259 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OGFOD2Q6N063 350 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM63Q969Q1 353 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SLC6A17Q9H1V8 727 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CNTN3Q9P232 1028 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 IQGAP1P46940 1657 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CXorf49A8MYA2 514 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FSCN2O14926 492 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PI15O43692 258 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CEBPBP17676 345 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 AZGP1P25311 298 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 HNF1BP35680 557 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 HCAR3P49019 387 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ARHGDIBP52566 201 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C18orf21Q32NC0 220 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM214Q6NUQ4 689 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ZYG11AQ6WRX3 759 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 HSDL2Q6YN16 418 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RANBP3LQ86VV4 465 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 STX12Q86Y82 276 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TNFRSF25Q93038 417 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C11orf24Q96F05 449 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SMURF1Q9HCE7 757 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SLC2A4RGQ9NR83 387 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SLCO3A1Q9UIG8 710 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FZD4Q9ULV1 537 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C2orf92A0A1B0GVN3 265 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 DCNP07585 359 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PPIDQ08752 370 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 KLF10Q13118 480 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 KLHL26Q53HC5 615 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 AENQ8WTP8 325 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 DUSP26Q9BV47 211 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PCDHAC1Q9H158 963 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OTOL1A6NHN0 477 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 K7EPI3 171 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ACTR3P61158 418 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms