RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FABP3P05413 133 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 YES1P07947 543 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ADRA2AP08913 450 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 RRM2P31350 389 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 LHX1P48742 406 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF79Q15937 498 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 LRIF1Q5T3J3 769 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 RAP1GAP2Q684P5 730 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PSAPL1Q6NUJ1 521 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 OR4K2Q8NGD2 314 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 RNF31Q96EP0 1072 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 RIPOR3Q96MK2 946 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 MCCC1Q96RQ3 725 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ROGDIQ9GZN7 287 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SAMD4AQ9UPU9 718 aaKnown RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 TRAPPC4Q9Y296 219 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PCDHB5Q9Y5E4 795 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 V9GYH0 126 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 CLCA1A8K7I4 914 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 IQCF5A8MTL0 148 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 WASH4PA8MWX3 477 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 M0R129 80 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 AGRPO00253 132 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SLITRK5O94991 958 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 HNF4AP41235 474 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 MLLT6P55198 1093 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 TAB1Q15750 504 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SMU1Q2TAY7 513 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ARMC4Q5T2S8 1044 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF683Q8IZ20 524 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 GLB1L3Q8NCI6 653 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 CEP19Q96LK0 163 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PRRG3Q9BZD7 231 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 IPPKQ9H8X2 491 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 VPS4AQ9UN37 437 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 MYO16Q9Y6X6 1858 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 GFRA2O00451 464 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 GPR39O43194 453 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 TLR5O60602 858 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 VPS26AO75436 327 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 UGT2B17O75795 530 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 CCNDBP1O95273 360 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SLC25A27O95847 323 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 IL7P13232 177 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PKMP14618 531 aaKnown RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 IL2P60568 153 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 ABHD18Q0P651 414 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 GPAT3Q53EU6 434 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SGO1Q5FBB7 561 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SCD5Q86SK9 330 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 CIR1Q86X95 450 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 OR5H6Q8NGV6 325 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SETD6Q8TBK2 473 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 OR5M11Q96RB7 305 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PAAF1Q9BRP4 392 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 GABARAPL3Q9BY60 117 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 NMUR1Q9HB89 426 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SMURF1Q9HCE7 757 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
ZNF558-201ENST00000301475 SPASTQ9UBP0 616 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PRELID1Q9Y255 219 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PCDHGB2Q9Y5G2 931 aa10.58□□□□□ -0.72
ZNF558-201ENST00000301475 PTPRDP23468 1912 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 A0A1W2PQ09 198 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 WNT9AO14904 365 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TSPAN3O60637 253 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ERN1O75460 977 aaKnown RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 SOX6P35712 828 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 CD83Q01151 205 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 PCBP2Q15366 365 aaKnown RBP eCLIP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ERAP2Q6P179 960 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TRAF7Q6Q0C0 670 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 SPERTQ8NA61 448 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 GPR151Q8TDV0 419 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ASB15Q8WXK1 588 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 MAP6Q96JE9 813 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 HSH2DQ96JZ2 352 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 NSUN3Q9H649 340 aaKnown RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 NLE1Q9NVX2 485 aaPredicted RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 NUDT4Q9NZJ9 180 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF490Q9ULM2 529 aaPredicted RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 CFL2Q9Y281 166 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 FNDC3AQ9Y2H6 1198 aaKnown RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 KLHL20Q9Y2M5 609 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 MEN1O00255 615 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 AOC2O75106 756 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ITGB1P05556 798 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms