RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SAMD4AQ9UPU9 718 aaKnown RBP14.28□□□□□ -0.12
COL6A2-201ENST00000300527 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 LRRC37A2A6NM11 1700 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 CLDN24A6NM45 220 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 CBX4O00257 560 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 HTR3AP46098 478 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 SNRPD2P62316 118 aaKnown RBP14.27□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF45Q02386 682 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 MFSD10Q14728 455 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.12
COL6A2-201ENST00000300527 SMU1Q2TAY7 513 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF605Q86T29 641 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 SELENOMQ8WWX9 145 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 BHMTQ93088 406 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF566Q969W8 418 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 FAM105AQ9NUU6 356 aa14.27□□□□□ -0.12
COL6A2-201ENST00000300527 A0A0G2JLL6 359 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 RETP07949 1114 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 RRM2P31350 389 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 ST3GAL4Q11206 333 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 FAM151BQ6UXP7 276 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 LINGO4Q6UY18 593 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 PRRT2Q7Z6L0 340 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 MAL2Q969L2 176 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 COQ7Q99807 217 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 CIPCQ9C0C6 399 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 ZNF408Q9H9D4 720 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 SNTG1Q9NSN8 517 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 PEX16Q9Y5Y5 336 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 WDR47O94967 919 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 IGLV3-25P01717 112 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 PBX3P40426 434 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 INO80DQ53TQ3 878 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 SNX20Q7Z614 316 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 TSPYL5Q86VY4 417 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 SLC44A2Q8IWA5 706 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-201ENST00000300527 CHPFQ8IZ52 775 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 MYDGFQ969H8 173 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 TM9SF3Q9HD45 589 aa14.27□□□□□ -0.13
COL6A2-201ENST00000300527 AREL1O15033 823 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 ENGP17813 658 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 HOXC13P31276 330 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 OR1E2P47887 323 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 KIAA0040Q15053 153 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 THEM5Q8N1Q8 247 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 CAMKK1Q8N5S9 505 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 TP53I13Q8NBR0 393 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 GPR150Q8NGU9 434 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 APH1BQ8WW43 257 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 GGHQ92820 318 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 GTPBP3Q969Y2 492 aaKnown RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 CPPED1Q9BRF8 314 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 SLC30A2Q9BRI3 323 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 ST3GAL5Q9UNP4 418 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 LYVE1Q9Y5Y7 322 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 SMIM35A0A1B0GVV1 85 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 LPOP22079 712 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 KRR1Q13601 381 aaKnown RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 KEAP1Q14145 624 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 TYSND1Q2T9J0 566 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 ERAP2Q6P179 960 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 IPCEF1Q8WWN9 437 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 TRIM62Q9BVG3 475 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 BOCQ9BWV1 1114 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 CSNK1G1Q9HCP0 422 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 NLE1Q9NVX2 485 aaPredicted RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 NDRG4Q9ULP0 352 aaKnown RBP14.26□□□□□ -0.13
COL6A2-201ENST00000300527 CARD8Q9Y2G2 431 aa14.26□□□□□ -0.13
COL6A2-201ENST00000300527 NUDT7P0C024 238 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 CKMT1AP12532 417 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 HTR2BP41595 481 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 SERINC3Q13530 473 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 CEP78Q5JTW2 689 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 AFMIDQ63HM1 303 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 SYCE2Q6PIF2 218 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ZNF551Q7Z340 670 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TP53INP1Q96A56 240 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 FEVQ99581 238 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 NUDT4Q9NZJ9 180 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TEKT2Q9UIF3 430 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 FAM220BPB1ANY3 271 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 HAS3O00219 553 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 GFRA2O00451 464 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 SSTR4P31391 388 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TNFSF8P32971 234 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TTPAP49638 278 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 UGT2B15P54855 530 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 IL10RBQ08334 325 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms