RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ARHGAP11BQ3KRB8 267 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 ZACNQ401N2 412 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NCEH1Q6PIU2 408 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 PAPD5Q8NDF8 572 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NCSTNQ92542 709 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RBM22Q9NW64 420 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 TMEM248Q9NWD8 314 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 RNF181Q9P0P0 153 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 NPIPA1Q9UND3 350 aa10.94□□□□□ -0.66
HDGFL3-201ENST00000299633 DAPL1A0PJW8 107 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ENSAO43768 121 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 BIDP55957 195 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PPIGQ13427 754 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 RBM23Q86U06 439 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 MCEMP1Q8IX19 187 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 IDI2Q9BXS1 227 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CEMIPQ8WUJ3 1361 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GPR75-ASB3A0A0A6YYF3 556 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 RAMP2O60895 175 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 STAG3L1P0CL83 205 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ARP10275 920 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CACUL1Q86Y37 369 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 JAGN1Q8N5M9 183 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 LRFN5Q96NI6 719 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 TAS2R9Q9NYW1 312 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 RAP2CQ9Y3L5 183 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CREBL2O60519 120 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CD247P20963 164 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 EPHB3P54753 998 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 HEPACAMQ14CZ8 416 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 MIB1Q86YT6 1006 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CPSF7Q8N684 471 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CRAMP1Q96RY5 1269 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PEA15Q15121 130 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 YIPF7Q8N8F6 280 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 OR5B17Q8NGF7 314 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 COL6A2P12110 1019 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 C5orf34Q96MH7 638 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 XPNPEP1Q9NQW7 623 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 BTRCQ9Y297 605 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SPATA31D1Q6ZQQ2 1576 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 BEST1O76090 585 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PROSCO94903 275 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 FAM111BQ6SJ93 734 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GK5Q6ZS86 529 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 NR4A3Q92570 626 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF559Q9BR84 538 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SRRDQ9UH36 339 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CNOT11Q9UKZ1 510 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 HYKKA2RU49 373 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 KCNJ13O60928 360 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CDRT1O95170 752 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 IL3P08700 152 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GSTM2P28161 218 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHB18PQ96TA0 734 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 FBXO10Q9UK96 956 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 NDUFAF5Q5TEU4 345 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 REP15Q6BDI9 236 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ETFRF1Q6IPR1 90 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SNX29P2Q8IUI4 249 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 UEVLDQ8IX04 471 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 DEDD2Q8WXF8 326 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PPIL3Q9H2H8 161 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SMCHD1A6NHR9 2005 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 MEGF6O75095 1541 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 NT5C1B-RDH14C9J2C7 533 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CYP11A1P05108 521 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ALPPP05187 535 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 POU2F1P14859 743 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 HOXD10P28358 340 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 OR1G1P47890 313 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GALNT1Q10472 559 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 CNKSR3Q6P9H4 555 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 WDR53Q7Z5U6 358 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 FAM131BQ86XD5 332 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 LIN28AQ9H9Z2 209 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ZNF358Q9NW07 568 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PAHP00439 452 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ARL9Q6T311 187 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GPR180Q86V85 440 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 RALGPS2Q86X27 583 aaPredicted RBP10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 GRIN3AQ8TCU5 1115 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 ATG4CQ96DT6 458 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 PCDHB5Q9Y5E4 795 aa10.93□□□□□ -0.66
HDGFL3-201ENST00000299633 JUNP05412 331 aaKnown RBP10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 BMP6P22004 513 aa10.92□□□□□ -0.66
HDGFL3-201ENST00000299633 LRRN4Q8WUT4 740 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms