RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 AMD1P17707 334 aa24.8■■□□□ 1.56
SDCCAG3-201ENST00000298537 DHDDSQ86SQ9 333 aa24.8■■□□□ 1.56
SDCCAG3-201ENST00000298537 ZNF740Q8NDX6 193 aa24.8■■□□□ 1.56
SDCCAG3-201ENST00000298537 OR7G3Q8NG95 312 aa24.8■■□□□ 1.56
SDCCAG3-201ENST00000298537 KCNE2Q9Y6J6 123 aa24.8■■□□□ 1.56
SDCCAG3-201ENST00000298537 TCRBV21S2A2A0A5A6 115 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 MAPK9P45984 424 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 CCINQ13939 588 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 NANOGP8Q6NSW7 305 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 APOOQ9BUR5 198 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 C8orf33Q9H7E9 229 aaPredicted RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 NANOGQ9H9S0 305 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 C2orf42Q9NWW7 574 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 PPT2Q9UMR5 302 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 SUFUQ9UMX1 484 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 ATP6V1B2P21281 511 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 IRX1P78414 480 aaPredicted RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 PLOD1Q02809 727 aaPredicted RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 MAD2L1Q13257 205 aaPredicted RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 SKIV2LQ15477 1246 aaKnown RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 DNAJC14Q6Y2X3 702 aaPredicted RBP24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 CMTM7Q96FZ5 175 aa24.79■■□□□ 1.56
SDCCAG3-201ENST00000298537 NVLO15381 856 aaKnown RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 UGDHO60701 494 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 MRPS21P82921 87 aaKnown RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 THEMIS2Q5TEJ8 643 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 UNC5DQ6UXZ4 953 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 HUS1BQ8NHY5 278 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 CLMPQ9H6B4 373 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 FGF22Q9HCT0 170 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 ASIC5Q9NY37 505 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 H0YIV9 168 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 PSMB5P28074 263 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 MTPNP58546 118 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 SLBPQ14493 270 aaKnown RBP eCLIP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 MLF2Q15773 248 aaPredicted RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 LILRA2Q8N149 483 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 FAM3CQ92520 227 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 INSM2Q96T92 566 aaPredicted RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 UBE2ZQ9H832 354 aaPredicted RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 PRM3Q9NNZ6 103 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 SLC6A13Q9NSD5 602 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 GEMIN8Q9NWZ8 242 aaKnown RBP24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 GPSM3Q9Y4H4 160 aa24.78■■□□□ 1.56
SDCCAG3-201ENST00000298537 KANSL1LA0AUZ9 987 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 ACADMP11310 421 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 GABRG2P18507 467 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 TPMTP51580 245 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 RPA4Q13156 261 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 SMU1Q2TAY7 513 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 LRIT3Q3SXY7 679 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 GTDC1Q4AE62 458 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 NOXRED1Q6NXP6 359 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 SLC13A3Q8WWT9 602 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 MENTQ9BUN1 341 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 SPATA6Q9NWH7 488 aaPredicted RBP24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 SLC17A4Q9Y2C5 497 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 DFNA5O60443 496 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 PGRP06401 933 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 PRPH2P23942 346 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 PEX2P28328 305 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 HNF4AP41235 474 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 TAF11Q15544 211 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 MAP7D1Q3KQU3 841 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 OR5K2Q8NHB8 316 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 HMGB4Q8WW32 186 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 RAD51AP1Q96B01 352 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 CCDC177Q9NQR7 707 aaPredicted RBP24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 VAPAQ9P0L0 249 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 VPS29Q9UBQ0 182 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 PNMA8BQ9ULN7 279 aaPredicted RBP24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 LRRC42Q9Y546 428 aa24.77■■□□□ 1.56
SDCCAG3-201ENST00000298537 OR52A4PA6NMU1 304 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 AKAP10O43572 662 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 GSK3BP49841 420 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 RPS13P62277 151 aaKnown RBP24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 CLCA4Q14CN2 919 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 MUM1Q2TAK8 710 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 PYCR3Q53H96 274 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 ANKRD46Q86W74 232 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 DCUN1D3Q8IWE4 304 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 DPP10Q8N608 796 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 GPR156Q8NFN8 814 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 GTF2H4Q92759 462 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 DNASE1L2Q92874 299 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 BTBD1Q9H0C5 482 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 COPS7BQ9H9Q2 264 aaPredicted RBP24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 PREBQ9HCU5 417 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 ITM2CQ9NQX7 267 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 EBF1Q9UH73 591 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 PCM1Q15154 2024 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 CROCCQ5TZA2 2017 aa24.76■■□□□ 1.55
SDCCAG3-201ENST00000298537 AXIN1O15169 862 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 CDH1P12830 882 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 NCK1P16333 377 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 TEAD1P28347 426 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 LIPEQ05469 1076 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 SLCO4A1Q96BD0 722 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 C12orf66Q96MD2 445 aa24.75■■□□□ 1.55
SDCCAG3-201ENST00000298537 SLC35G4P0C7Q5 338 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms