RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KIAA0513O60268 411 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 GJB3O75712 270 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 SLC25A27O95847 323 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 MYCP01106 439 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 PTHP01270 115 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 DARSP14868 501 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 TNFSF8P32971 234 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 HTR2BP41595 481 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 VLDLRP98155 873 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 C19orf48Q6RUI8 117 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 IDO2Q6ZQW0 420 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF551Q7Z340 670 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 DEPDC4Q8N2C3 294 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 TMEM86AQ8N2M4 240 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 FAM109AQ8N4B1 249 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 SIDT2Q8NBJ9 832 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 LINGO1Q96FE5 620 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 COL21A1Q96P44 957 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 TRNT1Q96Q11 434 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 KCNH6Q9H252 994 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 ASIC5Q9NY37 505 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 SPASTQ9UBP0 616 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 V9GYH0 126 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 PTGESO14684 152 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 OLR1P78380 273 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 ARMC4Q5T2S8 1044 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 CD200R1Q8TD46 325 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 MAP6Q96JE9 813 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 THUMPD1Q9NXG2 353 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 PAPPA2Q9BXP8 1791 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 FADS2P1A8MWK0 482 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 RGS14O43566 566 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 AOC2O75106 756 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 VPS26AO75436 327 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 NDUFS3O75489 264 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 VIPP01282 170 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PIRTP0C851 137 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 IL32P24001 234 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PTPN6P29350 595 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 NUDT1P36639 197 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF140P52738 457 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ITGA1P56199 1179 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 IL2P60568 153 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 FCHO2Q0JRZ9 810 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PTPRNQ16849 979 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 SUSD1Q6UWL2 747 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ZSWIM9Q86XI8 627 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TMEM132CQ8N3T6 1108 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 MCCC1Q96RQ3 725 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 KCNS3Q9BQ31 491 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 SMURF1Q9HCE7 757 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 NLE1Q9NVX2 485 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 CACNG4Q9UBN1 327 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 NIPSNAP2O75323 286 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 OTCP00480 354 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 CD9P21926 228 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 GGT2P36268 569 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 OR3A3P47888 321 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 CRISP3P54108 245 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TTLL9Q3SXZ7 439 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 INO80DQ53TQ3 878 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 AFTPHQ6ULP2 937 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 RNF165Q6ZSG1 346 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 GALNT6Q8NCL4 622 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 REEP1Q9H902 201 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 AMBNQ9NP70 447 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 IPPQ9Y573 584 aa13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 TNPO3Q9Y5L0 923 aaKnown RBP13.13□□□□□ -0.31
RPUSD4-201ENST00000298317 PLK4O00444 970 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF780AO75290 641 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms