RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TMEM102Q8N9M5 508 aaPredicted RBP20.68■□□□□ 0.9
SOX17-201ENST00000297316 FBRSQ9HAH7 460 aa20.68■□□□□ 0.9
SOX17-201ENST00000297316 E7EQ34 232 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 ACADMP11310 421 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 SOX11P35716 441 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 GSK3BP49841 420 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 CLDN2P57739 230 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 NANOGP8Q6NSW7 305 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 OR5AR1Q8NGP9 310 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 NANOGQ9H9S0 305 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 COL6A3P12111 3177 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 PCM1Q15154 2024 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 CLGNO14967 610 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 BCKDHAP12694 445 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 GABRG2P18507 467 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 GRIA3P42263 894 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 SELPLGQ14242 412 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 IFNEQ86WN2 208 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 DPP10Q8N608 796 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 HMGB4Q8WW32 186 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 LRGUKQ96M69 825 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 IL17FQ96PD4 163 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 PHPT1Q9NRX4 125 aaPredicted RBP20.67■□□□□ 0.9
SOX17-201ENST00000297316 C2orf42Q9NWW7 574 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 SNX6Q9UNH7 406 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 ASF1AQ9Y294 204 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 USP34Q70CQ2 3546 aa20.67■□□□□ 0.9
SOX17-201ENST00000297316 POM121BA6NF01 834 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 ACP5P13686 325 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 TPMTP51580 245 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 LIPEQ05469 1076 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 SMU1Q2TAY7 513 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 C2orf73Q8N5S3 287 aaPredicted RBP20.66■□□□□ 0.9
SOX17-201ENST00000297316 APIPQ96GX9 242 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 PPM1MQ96MI6 270 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 VCXQ9H320 206 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 DPEP2Q9H4A9 486 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 ASIC5Q9NY37 505 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 MOSPD1Q9UJG1 213 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 MMP17Q9ULZ9 603 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 SH2B3Q9UQQ2 575 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 AP4S1Q9Y587 144 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 H0Y8X5 98 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 MYCLP1P12525 358 aaPredicted RBP20.66■□□□□ 0.9
SOX17-201ENST00000297316 FAM174BQ3ZCQ3 159 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 SPANXN4Q5MJ08 99 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 EOGTQ5NDL2 527 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 SPPL2CQ8IUH8 684 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 SYTL1Q8IYJ3 562 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 OR56A3Q8NH54 315 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 PIF1Q9H611 641 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 FZD4Q9ULV1 537 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 NCKAP1Q9Y2A7 1128 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 DTNAQ9Y4J8 743 aa20.66■□□□□ 0.9
SOX17-201ENST00000297316 CEACAM5P06731 702 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 JUPP14923 745 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 TACR1P25103 407 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 IRF8Q02556 426 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 MAD2L1Q13257 205 aaPredicted RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 TCEA2Q15560 299 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 SMAD2Q15796 467 aaKnown RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 XKR6Q5GH73 641 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 ADNP2Q6IQ32 1131 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 DUS1LQ6P1R4 473 aaKnown RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 PDZD3Q86UT5 571 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 TICAM1Q8IUC6 712 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 OR2T34Q8NGX1 318 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 ATL1Q8WXF7 558 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 LRTOMTQ8WZ04 291 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 APOOQ9BUR5 198 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 DPY30Q9C005 99 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 ALG2Q9H553 416 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 PREBQ9HCU5 417 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 ARPC2O15144 300 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 MAP3K13O43283 966 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 PEX1O43933 1283 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 MTHFD1P11586 935 aaKnown RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 TBPL1P62380 186 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 CACHD1Q5VU97 1274 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 METRNLQ641Q3 311 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 FRG2Q64ET8 278 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 OXR1Q8N573 874 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 OR9A1PQ8NGU1 263 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 CANT1Q8WVQ1 401 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 DUS3LQ96G46 650 aaKnown RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 FRG2BQ96QU4 278 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 CDX2Q99626 313 aaPredicted RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 SEMA6AQ9H2E6 1030 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 EBF1Q9UH73 591 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 SCML1Q9UN30 329 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 KCNK6Q9Y257 313 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 WDR37Q9Y2I8 494 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 TDRKHQ9Y2W6 561 aaKnown RBP20.65■□□□□ 0.9
SOX17-201ENST00000297316 AK5Q9Y6K8 562 aa20.65■□□□□ 0.9
SOX17-201ENST00000297316 ENO4A6NNW6 628 aa20.64■□□□□ 0.89
SOX17-201ENST00000297316 IFRD1O00458 451 aaPredicted RBP20.64■□□□□ 0.89
SOX17-201ENST00000297316 KMOO15229 486 aa20.64■□□□□ 0.89
SOX17-201ENST00000297316 SRFP11831 508 aa20.64■□□□□ 0.89
SOX17-201ENST00000297316 NCK1P16333 377 aa20.64■□□□□ 0.89
SOX17-201ENST00000297316 MTPNP58546 118 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms